| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g036590.1 |
| Family | GT5 |
| Protein Properties | Length: 278 Molecular Weight: 31055.9 Isoelectric Point: 6.7304 |
| Chromosome | Chromosome/Scaffold: 4 Start: 66387001 End: 66389621 |
| Description | starch synthase 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 2 | 196 | 1.1e-30 |
| CGLDPNKLHRPDRLQDTNKTHLVNILKGGIVYSNKVILMSSTDSKDSLIHGSRHGLQSTLTTHKEKISVASYGLDGELWDPSKDIFLPRRYSANDIEGKS ICRQALRRRLRFNGDSSIIVGCICDDNSDIHSLKEAVHVALRRNSQGDKIAFVEAYDESLAHLIYAGSDIILCSSFEDPSLQTAMKAIKYGSVPV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 278 Download |
| MCGLDPNKLH RPDRLQDTNK THLVNILKGG IVYSNKVILM SSTDSKDSLI HGSRHGLQST 60 LTTHKEKISV ASYGLDGELW DPSKDIFLPR RYSANDIEGK SICRQALRRR LRFNGDSSII 120 VGCICDDNSD IHSLKEAVHV ALRRNSQGDK IAFVEAYDES LAHLIYAGSD IILCSSFEDP 180 SLQTAMKAIK YGSVPVQLNF PSDESRELEG HGCPNTAMSQ YIISTYGDLS LSQTLDDFNN 240 DPSHWDRQIK DGMARGSSWD MKCYNLHWDA YSSIRKL* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0297 | GlgA | 4.0e-23 | 24 | 196 | 198 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 2.0e-31 | 3 | 260 | 296 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PRK00654 | glgA | 5.0e-32 | 24 | 276 | 291 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 9.0e-34 | 22 | 260 | 272 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PLN02939 | PLN02939 | 2.0e-36 | 2 | 260 | 294 | + transferase, transferring glycosyl groups | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACC78131.1 | 0 | 1 | 277 | 401 | 700 | starch synthase V precursor [Oryza sativa] |
| GenBank | EEC74203.1 | 0 | 1 | 277 | 398 | 697 | hypothetical protein OsI_09361 [Oryza sativa Indica Group] |
| RefSeq | NP_001048453.1 | 0 | 1 | 277 | 104 | 403 | Os02g0807100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001123603.1 | 0 | 1 | 277 | 402 | 701 | starch synthase V [Zea mays] |
| RefSeq | XP_002453009.1 | 0 | 1 | 277 | 1 | 277 | hypothetical protein SORBIDRAFT_04g036590 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rzv_B | 0.0000000001 | 24 | 274 | 197 | 475 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzv_A | 0.0000000001 | 24 | 274 | 197 | 475 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzu_B | 0.0000000001 | 24 | 274 | 197 | 475 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| PDB | 1rzu_A | 0.0000000001 | 24 | 274 | 197 | 475 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| PDB | 3d1j_A | 0.0000000007 | 24 | 196 | 195 | 394 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CD234653 | 138 | 141 | 278 | 0 |
| DV532675 | 138 | 141 | 278 | 0 |
| FL961900 | 184 | 120 | 278 | 0 |
| DV455772 | 237 | 1 | 211 | 0 |
| CB632617 | 193 | 109 | 278 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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