| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g038410.1 |
| Family | GT4 |
| Protein Properties | Length: 839 Molecular Weight: 95114.9 Isoelectric Point: 8.3327 |
| Chromosome | Chromosome/Scaffold: 4 Start: 67822406 End: 67825762 |
| Description | sucrose synthase 6 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 560 | 726 | 0 |
| ENRRKPVIFSMARLDKVKNITGLVEWYGQDKRLRVLVNLVVVGGLLDPTQSKDREEIEEINKMHSLINKYQLKGQIRWIKAQTDRVRNGELYRCIADTRG AFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDEVSGFHINPLDGKEASNKIANFFQKCNE | |||
| Full Sequence |
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| Protein Sequence Length: 839 Download |
| MMPEALRQSR YHMKRCFQRF VSQGSRLMKQ QHLLEELHGG GSADNNKQLA ADGFLGHVIS 60 CTHEAVVLPP YVALAVRRNP GVWEYITVHS GDLTVQQITP SDYLKRKEIL FLYDNSSQLE 120 VNLGALDLST PRLTLPCSIG NGMHLVSRFL SSRLGGGGGR TKNKALLDYL LALRYYRRRP 180 GDQQQINNKL LISDTLDTVG KLQAALLLAQ AFVSEQHPDT PYQQMAHRFQ EWGLEKGWGD 240 TAEACGHTLA CLAEVLQAPD PASIHRFFSR VPSVFDVVIF SVHGYFGQHK VLGMPDTGGQ 300 VVYILDQVRA LEEELLQRIK GQGLTFTPNI LVLTRLIPEA KGTTCNVELE PIENTRHSSI 360 LRVPFKTQDG QDLPHWVSRF DIYPYLERYA QILDILGRKP DLVIGNYTDG NLVAYLVSRK 420 LGVTQGTIAH ALEKTKYEDS DVKWREMDHK YHFSCQFTAD MIAMNTSDFI IASTYQEIAG 480 SKDKPGQYES HYAFTMPGLC RFATGINVFD PKFNIAAPGA DQSVYFPFTL KHKRLTDLHP 540 QIEALVYGKE ENDEHIGYLE NRRKPVIFSM ARLDKVKNIT GLVEWYGQDK RLRVLVNLVV 600 VGGLLDPTQS KDREEIEEIN KMHSLINKYQ LKGQIRWIKA QTDRVRNGEL YRCIADTRGA 660 FVQPALYEAF GLTVIEAMNC GLPTFATNQG GPAEIIVDEV SGFHINPLDG KEASNKIANF 720 FQKCNEDPMY WNRMSTAGLQ RIYECYTWQI YATKVLNMGS MYGFWRTLDK EEKQAKQQYL 780 QMFYNLHFRK LANAVPKVGE QPEQATAVPL PDRSAPRPKE RQVCPLLRNL LKIKWGSN* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02472 | sucr_P_syn_N | 8.0e-55 | 277 | 758 | 495 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
| cd03800 | GT1_Sucrose_synthase | 1.0e-103 | 277 | 756 | 484 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
| PLN00142 | PLN00142 | 0 | 1 | 806 | 813 | + sucrose synthase | ||
| TIGR02470 | sucr_synth | 0 | 10 | 796 | 796 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| pfam00862 | Sucrose_synth | 0 | 2 | 548 | 556 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005985 | sucrose metabolic process |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAE03896.2 | 0 | 2 | 822 | 17 | 834 | OSJNBb0026I12.4 [Oryza sativa (japonica cultivar-group)] |
| EMBL | CAH66603.1 | 0 | 2 | 822 | 17 | 834 | H0211A12.6 [Oryza sativa (indica cultivar-group)] |
| GenBank | EEC76883.1 | 0 | 2 | 822 | 17 | 834 | hypothetical protein OsI_15088 [Oryza sativa Indica Group] |
| RefSeq | NP_001048620.1 | 0 | 1 | 838 | 14 | 846 | Os02g0831500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002453097.1 | 0 | 1 | 838 | 1 | 838 | hypothetical protein SORBIDRAFT_04g038410 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s29_H | 0 | 2 | 796 | 18 | 803 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 3s29_G | 0 | 2 | 796 | 18 | 803 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 3s29_F | 0 | 2 | 796 | 18 | 803 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 3s29_E | 0 | 2 | 796 | 18 | 803 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 3s29_D | 0 | 2 | 796 | 18 | 803 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| galactose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| sucrose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| UDP-glucose biosynthesis (from sucrose) | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794519 | 804 | 2 | 796 | 0 |
| BU103683 | 814 | 16 | 822 | 0 |
| FG227316 | 455 | 274 | 723 | 0 |
| GO872338 | 325 | 497 | 821 | 0 |
| CX109054 | 613 | 89 | 693 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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