y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb04g038510.1 |
Family | GT48 |
Protein Properties | Length: 1943 Molecular Weight: 223802 Isoelectric Point: 9.4012 |
Chromosome | Chromosome/Scaffold: 4 Start: 67875331 End: 67898850 |
Description | glucan synthase-like 12 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT48 | 1049 | 1798 | 0 |
VPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLFSSQALGEQNEDGVSILFYLQKIYPDEWKNFLERVHCESEDQLHETEQSEEQLR LWASYRGQTLTRTVRGMMYYRQALVLQAFLDMARDDDLMEGFRAADLLSESDESQLLTQCKAIADMKFTYVVSCQQYGIQKRSGDPHAQDILRLMTTYPS LRVAYIDEVEEPSKDRNKKIEKVYYSALVKAAVTKPDDPGQKLDQDIYRIKLPGNAMLGEGKPENQNHAIIFTRGEGLQTIDMNQEHYMEETLKMRNLLQ EFLKKHDGVRYPSILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLANPLRVRFHYGHPDIFDRLFHLTRGGVSKASKIINLSEDIFAGFNSTLREGN VTHHEYMQVGKGRDVGLNQISLFEAKIANGNGEQTLSRDVYRLGHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFLYGRLYLVLSGLDEALATGKRFIH NEPLQVALASQSFVQLGFLMALPMMMEIGLERGFRTALSDFVLMQLQLASVFFTFSLGTKTHYYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSH FVKGIELMILLIVYEIFGQSYRGAIAYIFITISMWFMVVTWLFAPFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGVPPEKSWESWWEKEQEPLRHSGKR GTVLEIVLALRFFIYQYGLVYHLNITTHTKSVLVYCISWVIIFVILLVMK |
Full Sequence |
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Protein Sequence Length: 1943 Download |
MASSSGGGGG RRLAPGGDAS PASAGARRIY RTQTAGNLGD SIFDSEVVPS SLVEIAPILR 60 VANEVEASNP RVAYLCRFYA FEKAHRLDPT SSGRGVRQFK TALLQRLERE NDPTLKGRVK 120 QSDAREMQSF YQHYYKKYIQ ALQNAADKAD RAQLTKAYQT AAVLFEVLKA VNVSQKIEVD 180 QSILETHNQV EEKKKLYLPY NILPLDPDSA NQAIMRYPEI QAAFHALRNT RGLPWPKEHD 240 KKPDADLLAW LQAMFGFQKD NVSNQREHLI LLLANVHIRQ IPKPEQQPKL DDRALDTVMK 300 KLFKNYKRWC KYLGRKSSLW LPTIQQEVQQ RKLLYMGLYL LIWGEAANLR FMPECLCYIY 360 HHMAFELYGM LAGNVSPTTG ENVKPAYGGE EEAFLKRVVT PIYKVIEKEV ERSKTMKSKH 420 SHWRNYDDLN EYFWSRDCFR LGWPMRSDAD FFKTPNVSLH HLDGEDRPVG NGNWMGKVNF 480 VEIRSFWHIF RSFDRMWSFL ILSLQAMIII AWNGGTPSDI FDRGVFKQVL SIFITAAILK 540 LGQAILDIIL SWKARRNMSL VVKLRYILKL LSAAAWVVIL PVTYAYTWEN PTGLARTIKS 600 WLGDGQNQPS LYILAVVIYL APNLLSATLF LFPVIRRALE RSNLRVVTFI MWWSQPRLFV 660 GRGMHEGAFS LFKYTMFWVL LLATKLVVSF YVEIKPLVQP TKDIMKEPIR TFKWHEFFPH 720 ANNNIGVVIA LWAPIILVYF MDTQIWYAIF STLIGGVYGA CRRLGEIRTL GMLRSRFESL 780 PKAFNQCLIP SDTSKRRGFR AAFSKPSKTP EDTKEEEKIA ARFAQIWNLI ITSFREEDLI 840 DDREKDLLLV PYCKDRDMDI IQWPPFLLAS KIPIALDMAA DSGGKDRDLK KRMKSDPYFT 900 YAIKECYASF KNIIYALVIS SRERGFIQKI FDMVDEHITE ETLIKELNMS NLPTLSKKFI 960 ELLDLLESNN KEEQGQVIIL FQDMLEVVTR DIMVDQLSDL LESIHGPNNK RSEGMMPLDQ 1020 QVQLFTKAID FPIKRLRLLL TVKESAMDVP TNLDARRRIS FFANSLFMSM PDAPKVRQML 1080 PFSVLTPYYK EDVLFSSQAL GEQNEDGVSI LFYLQKIYPD EWKNFLERVH CESEDQLHET 1140 EQSEEQLRLW ASYRGQTLTR TVRGMMYYRQ ALVLQAFLDM ARDDDLMEGF RAADLLSESD 1200 ESQLLTQCKA IADMKFTYVV SCQQYGIQKR SGDPHAQDIL RLMTTYPSLR VAYIDEVEEP 1260 SKDRNKKIEK VYYSALVKAA VTKPDDPGQK LDQDIYRIKL PGNAMLGEGK PENQNHAIIF 1320 TRGEGLQTID MNQEHYMEET LKMRNLLQEF LKKHDGVRYP SILGVREHIF TGSVSSLAWF 1380 MSNQETSFVT IGQRVLANPL RVRFHYGHPD IFDRLFHLTR GGVSKASKII NLSEDIFAGF 1440 NSTLREGNVT HHEYMQVGKG RDVGLNQISL FEAKIANGNG EQTLSRDVYR LGHRFDFFRM 1500 LSCYYTTIGF YFSTMITVWT VYVFLYGRLY LVLSGLDEAL ATGKRFIHNE PLQVALASQS 1560 FVQLGFLMAL PMMMEIGLER GFRTALSDFV LMQLQLASVF FTFSLGTKTH YYGTTLLHGG 1620 AEYRATGRGF VVFHAKFAEN YRLYSRSHFV KGIELMILLI VYEIFGQSYR GAIAYIFITI 1680 SMWFMVVTWL FAPFLFNPSG FEWQKIVDDW TDWNKWISNR GGIGVPPEKS WESWWEKEQE 1740 PLRHSGKRGT VLEIVLALRF FIYQYGLVYH LNITTHTKSV LVYCISWVII FVILLVMKTV 1800 SVGRRKFSAE FQLVFRLIKG LIFITFISII IILIAIPHMT VQDIFVCILA FMPTGWGLLL 1860 IAQTMRSAIS HMGLWGSVKA LARGYEIIMG LLLFTPIAFL AWFPFVSEFQ TRMLFNQAFS 1920 RGLQISRILG GHKKDRAARN KE* 1980 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam04652 | DUF605 | 4.0e-11 | 55 | 169 | 120 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
pfam14288 | FKS1_dom1 | 5.0e-57 | 330 | 446 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
pfam02364 | Glucan_synthase | 0 | 1049 | 1794 | 828 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
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GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD23015.1 | 0 | 27 | 1942 | 35 | 1969 | putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] |
DDBJ | BAD62105.1 | 0 | 14 | 1942 | 3 | 1959 | putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] |
GenBank | EEE58116.1 | 0 | 27 | 1942 | 35 | 1918 | hypothetical protein OsJ_09005 [Oryza sativa Japonica Group] |
RefSeq | XP_002439067.1 | 0 | 26 | 1942 | 29 | 1965 | hypothetical protein SORBIDRAFT_10g030970 [Sorghum bicolor] |
RefSeq | XP_002453103.1 | 0 | 1 | 1942 | 1 | 1942 | hypothetical protein SORBIDRAFT_04g038510 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2lxm_A | 0.002 | 59 | 168 | 21 | 128 | B Chain B, Lip5-chmp5 |
PDB | 2lxl_A | 0.004 | 59 | 168 | 21 | 128 | A Chain A, Lip5(mit)2 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |