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Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb05g000680.1 |
Family | AA1 |
Protein Properties | Length: 588 Molecular Weight: 63243.5 Isoelectric Point: 6.2274 |
Chromosome | Chromosome/Scaffold: 5 Start: 456265 End: 460986 |
Description | laccase 12 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 40 | 569 | 0 |
EQYHEFEVKEATVTRLCGTQRIMTVNGEFPGPTVEVAEGDALIVRVVNRGSYNVTVHWHGVRQMRTGWSDGPEFVTQCPIRPGNSYTYRFTVAGQEGTLW WHAHSSWLRATVHGALLIRPRAGVPYPFNDGNKPPAREIPIILGEWWNMNPIDVVRTATRTGAAPNISDALTVNGQPGDLYKCSSNGTTTFAVKSGETNL LRFINAALNTELFVSLAGHTMTVVGADASYTKPYTTSVLMIAPGQTTDVLVTFDQAPGRYYLAARAYASAQGVPFDNTTTTAIFDYGTGATTSSPAMPTL PAYNDTATATTFTTSLRGLRKAELPTTRVDESLFFTVGVGLFNCSSGQTCGGPNNTRFAASMNNVSFVLPSTTSILQAHYASGGATSAPAGVFTADFPAN PPVTFDYTAQNVSRALWQPVPGTKVYRLKYGAAVQLVLQGTNVFAAENHPIHLHGYDFYILAEGFGNFDAATDTAKFNMDDPPMRNTVGVPVNGWAVIRF VADNPGVWLMHCHLDVHITWGLAMAFLVED |
Full Sequence |
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Protein Sequence Length: 588 Download |
MQAPLGMSSS SSISWSSYSP LLLTTLALVL LCSHLTIAKE QYHEFEVKEA TVTRLCGTQR 60 IMTVNGEFPG PTVEVAEGDA LIVRVVNRGS YNVTVHWHGV RQMRTGWSDG PEFVTQCPIR 120 PGNSYTYRFT VAGQEGTLWW HAHSSWLRAT VHGALLIRPR AGVPYPFNDG NKPPAREIPI 180 ILGEWWNMNP IDVVRTATRT GAAPNISDAL TVNGQPGDLY KCSSNGTTTF AVKSGETNLL 240 RFINAALNTE LFVSLAGHTM TVVGADASYT KPYTTSVLMI APGQTTDVLV TFDQAPGRYY 300 LAARAYASAQ GVPFDNTTTT AIFDYGTGAT TSSPAMPTLP AYNDTATATT FTTSLRGLRK 360 AELPTTRVDE SLFFTVGVGL FNCSSGQTCG GPNNTRFAAS MNNVSFVLPS TTSILQAHYA 420 SGGATSAPAG VFTADFPANP PVTFDYTAQN VSRALWQPVP GTKVYRLKYG AAVQLVLQGT 480 NVFAAENHPI HLHGYDFYIL AEGFGNFDAA TDTAKFNMDD PPMRNTVGVP VNGWAVIRFV 540 ADNPGVWLMH CHLDVHITWG LAMAFLVEDG VGELESLEAP PADLPVC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 3.0e-52 | 46 | 162 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 4.0e-65 | 56 | 565 | 541 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 1.0e-71 | 38 | 576 | 592 | + oxidoreductase | ||
TIGR03388 | ascorbase | 1.0e-83 | 43 | 571 | 574 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 38 | 587 | 553 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF27393.2 | 0 | 62 | 587 | 1 | 522 | Os11g0108700 [Oryza sativa Japonica Group] |
RefSeq | NP_001044679.1 | 0 | 35 | 587 | 21 | 567 | Os01g0827300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001065548.1 | 0 | 39 | 587 | 23 | 567 | Os11g0108700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001065948.1 | 0 | 39 | 587 | 23 | 567 | Os12g0108000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002448873.1 | 0 | 1 | 587 | 1 | 587 | hypothetical protein SORBIDRAFT_05g000680 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 41 | 565 | 4 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1asq_A | 0 | 41 | 565 | 4 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1asp_B | 0 | 41 | 565 | 4 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1asp_A | 0 | 41 | 565 | 4 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1aso_B | 0 | 41 | 565 | 4 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |