| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb05g001260.1 |
| Family | GH5 |
| Protein Properties | Length: 385 Molecular Weight: 42926.4 Isoelectric Point: 5.8089 |
| Chromosome | Chromosome/Scaffold: 5 Start: 1327645 End: 1329448 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 24 | 357 | 3.8e-37 |
| SGRPFVVHGFNTYWLMYFAGDPATRPAVTAALADAAGAGLNVCRTWAFNDGGYRALQLKPFSYDEEVFQALDFVISEARNHKVRLILSLCNNWKDYGGKA QYVRWGKEAGLHLTSDDAFFSDATIKSYYKAFVKAVLTRKNTITNVAYMDDPTILAWELINEPHCHSDPSGDTLQAWIEEMASYVKSIDPVHLLEIGVEG YYGPSTPELLHVNPDAYSGTIGTDFIRNHRALGIDLASIHIYSDNWLPHSEEDSHLQFVKTWMQQHIDDAANLLGMPILIGEFGVSLKCGKFGHKFREAF METVYSTFLRSWKSGVIGGGCLVWQLFPESTEHM | |||
| Full Sequence |
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| Protein Sequence Length: 385 Download |
| MPPGGANEGE WAAVERRGPH LWASGRPFVV HGFNTYWLMY FAGDPATRPA VTAALADAAG 60 AGLNVCRTWA FNDGGYRALQ LKPFSYDEEV FQALDFVISE ARNHKVRLIL SLCNNWKDYG 120 GKAQYVRWGK EAGLHLTSDD AFFSDATIKS YYKAFVKAVL TRKNTITNVA YMDDPTILAW 180 ELINEPHCHS DPSGDTLQAW IEEMASYVKS IDPVHLLEIG VEGYYGPSTP ELLHVNPDAY 240 SGTIGTDFIR NHRALGIDLA SIHIYSDNWL PHSEEDSHLQ FVKTWMQQHI DDAANLLGMP 300 ILIGEFGVSL KCGKFGHKFR EAFMETVYST FLRSWKSGVI GGGCLVWQLF PESTEHMDDG 360 YAVFFAKSPS TLKLLTDHSR SLES* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12876 | Cellulase-like | 0.009 | 173 | 221 | 58 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| pfam00150 | Cellulase | 8.0e-7 | 23 | 311 | 296 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 3.0e-23 | 91 | 309 | 219 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ19452.1 | 0 | 14 | 383 | 2 | 368 | hypothetical protein OsJ_35013 [Oryza sativa Japonica Group] |
| GenBank | EEC67554.1 | 0 | 6 | 383 | 4 | 378 | hypothetical protein OsI_34887 [Oryza sativa Indica Group] |
| GenBank | EEE52650.1 | 0 | 6 | 383 | 4 | 381 | hypothetical protein OsJ_35012 [Oryza sativa Japonica Group] |
| Swiss-Prot | Q2RBB1 | 0 | 6 | 383 | 4 | 378 | MAN7_ORYSJ RecName: Full=Mannan endo-1,4-beta-mannosidase 7; AltName: Full=Beta-mannanase 7; AltName: Full=Endo-beta-1,4-mannanase 7; AltName: Full=OsMAN7 |
| RefSeq | XP_002450155.1 | 0 | 1 | 384 | 1 | 384 | hypothetical protein SORBIDRAFT_05g001260 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 18 | 382 | 11 | 369 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 17 | 308 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 17 | 308 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 17 | 308 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 17 | 308 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DT747977 | 292 | 14 | 305 | 0 |
| CA270579 | 191 | 195 | 385 | 0 |
| EX342637 | 278 | 33 | 309 | 0 |
| JK987915 | 291 | 11 | 301 | 0 |
| HX195966 | 244 | 8 | 249 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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