| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb05g020930.1 |
| Family | GT34 |
| Protein Properties | Length: 444 Molecular Weight: 48269.4 Isoelectric Point: 7.9036 |
| Chromosome | Chromosome/Scaffold: 5 Start: 51380580 End: 51382072 |
| Description | Galactosyl transferase GMA12/MNN10 family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT34 | 117 | 392 | 0 |
| KRPGPGGDHALLRFLKNKLDYCRLHGIELLYNTALLEPSMVAYWAKIPAVRAAMLAHPDAEWVWWVDADAVFTDMDFSLPLHRYGGHNLVVYGWEREVYE ERSWVGLNAGVFLIRNCQWSLDLMDAWARMGPASPEYARWGKTLREELEGKPNDESDDQSALVYLLSRHPERARWSNATFLESGYYFQGYWAEIVDRLDG VAARYEAVERGGVGRGLRRRHAEREHLLYAAARREAVRRRDGSGGGVPGPDGGGQKGWRRPFVTHFTGCQPCGGAP | |||
| Full Sequence |
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| Protein Sequence Length: 444 Download |
| MAASESVPFC VKGGGGAPRP HGGHLVVPGG RVREGLAFAA GAVVAALVLL SSASGLAPPP 60 VPNIVSLPVS SSSGNADAAS LSPAASRAAV GNDDPSLAYA EGVGQRRSLD ITDWDAKRPG 120 PGGDHALLRF LKNKLDYCRL HGIELLYNTA LLEPSMVAYW AKIPAVRAAM LAHPDAEWVW 180 WVDADAVFTD MDFSLPLHRY GGHNLVVYGW EREVYEERSW VGLNAGVFLI RNCQWSLDLM 240 DAWARMGPAS PEYARWGKTL REELEGKPND ESDDQSALVY LLSRHPERAR WSNATFLESG 300 YYFQGYWAEI VDRLDGVAAR YEAVERGGVG RGLRRRHAER EHLLYAAARR EAVRRRDGSG 360 GGVPGPDGGG QKGWRRPFVT HFTGCQPCGG APNRMYTRKR CAEGIRRALA FADDQVLRAY 420 GFRHAAPLSD SVAPLPFDYP AAH* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03182 | PLN03182 | 3.0e-16 | 377 | 435 | 67 | + xyloglucan 6-xylosyltransferase; Provisional | ||
| pfam05637 | Glyco_transf_34 | 2.0e-55 | 119 | 298 | 204 | + galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34. | ||
| PLN03182 | PLN03182 | 4.0e-107 | 111 | 321 | 242 | + xyloglucan 6-xylosyltransferase; Provisional | ||
| PLN03181 | PLN03181 | 0 | 66 | 443 | 410 | + glycosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016021 | integral to membrane |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY81250.1 | 0 | 1 | 442 | 1 | 482 | hypothetical protein OsI_36429 [Oryza sativa Indica Group] |
| RefSeq | NP_001068066.1 | 0 | 1 | 442 | 1 | 482 | Os11g0546500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001152534.1 | 0 | 1 | 443 | 1 | 473 | glycosyltransferase 6 [Zea mays] |
| RefSeq | XP_002449648.1 | 0 | 93 | 442 | 78 | 444 | hypothetical protein SORBIDRAFT_05g020910 [Sorghum bicolor] |
| RefSeq | XP_002450906.1 | 0 | 1 | 443 | 1 | 443 | hypothetical protein SORBIDRAFT_05g020930 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xyloglucan biosynthesis | RXN-12415 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
| xyloglucan biosynthesis | RXN-9461 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DR805912 | 262 | 93 | 325 | 0 |
| DV533702 | 262 | 93 | 325 | 0 |
| EE157588 | 262 | 93 | 325 | 0 |
| DR826165 | 261 | 94 | 325 | 0 |
| DV527050 | 262 | 93 | 325 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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