| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb05g022480.1 |
| Family | AA1 |
| Protein Properties | Length: 561 Molecular Weight: 61603.9 Isoelectric Point: 6.2612 |
| Chromosome | Chromosome/Scaffold: 5 Start: 54388238 End: 54390184 |
| Description | laccase 14 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 42 | 544 | 0 |
| YDFVIKETKVTRLCQEKTILAVNGQFPGPTIYARKGDVVVVNVYNQGSKNITLHWHGVDQPRNPCRAPASPSILFTEEEGTLWWHAHSDYGRTTVHGVIV IRPKDDGSAYPYPMPDGEVPIILGEWWNADAEQLFLEARRTGGDVKVSDANTINGQPGDYAPCSKNDTFRMSVEHGKTYLLRVINAGLTNHMFFAVAGHR LTVVGTDGHYVKPFTVDYIMIAGGQTMDLLLEANRTTNSSGDNNSRYYMAASPYYTNAGRVRYDDKVTTAILEYTDAPPCSGPPDYPYLPSVRDVAAATS YTAQLRSLASKDHPIDVPMVVDEHMLVTISSTVLPCEANNTCNGPLGGRIVQSLNSISFVPPAIDLLDAYYDSISGVYEPNFSNRPPLLQLTKQGTQVKV VEYGTVVEVVFQDDLTGEGHPMHLHGYSFYVVGQGFGKFNKYMDPAKYNLVDPPYQNTVSVPPNGWVAIRFRATNPGVWFMHCHIDIHMVWGMNAVFIVE NGK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 561 Download |
| MPAAGLCWLL LGVVLAFGVA ASPAQASRNS LLLEQSPAAG YYDFVIKETK VTRLCQEKTI 60 LAVNGQFPGP TIYARKGDVV VVNVYNQGSK NITLHWHGVD QPRNPCRAPA SPSILFTEEE 120 GTLWWHAHSD YGRTTVHGVI VIRPKDDGSA YPYPMPDGEV PIILGEWWNA DAEQLFLEAR 180 RTGGDVKVSD ANTINGQPGD YAPCSKNDTF RMSVEHGKTY LLRVINAGLT NHMFFAVAGH 240 RLTVVGTDGH YVKPFTVDYI MIAGGQTMDL LLEANRTTNS SGDNNSRYYM AASPYYTNAG 300 RVRYDDKVTT AILEYTDAPP CSGPPDYPYL PSVRDVAAAT SYTAQLRSLA SKDHPIDVPM 360 VVDEHMLVTI SSTVLPCEAN NTCNGPLGGR IVQSLNSISF VPPAIDLLDA YYDSISGVYE 420 PNFSNRPPLL QLTKQGTQVK VVEYGTVVEV VFQDDLTGEG HPMHLHGYSF YVVGQGFGKF 480 NKYMDPAKYN LVDPPYQNTV SVPPNGWVAI RFRATNPGVW FMHCHIDIHM VWGMNAVFIV 540 ENGKTSDAQM LPRPPNMPKC * 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03390 | ascorbOXfungal | 1.0e-44 | 55 | 542 | 543 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
| PLN02191 | PLN02191 | 3.0e-55 | 55 | 539 | 546 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 2.0e-59 | 55 | 538 | 533 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 6.0e-67 | 55 | 538 | 536 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 41 | 560 | 547 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001105915.1 | 0 | 41 | 560 | 39 | 584 | putative laccase [Zea mays] |
| RefSeq | XP_002449742.1 | 0 | 23 | 560 | 23 | 560 | hypothetical protein SORBIDRAFT_05g022480 [Sorghum bicolor] |
| RefSeq | XP_002452548.1 | 0 | 41 | 560 | 47 | 590 | hypothetical protein SORBIDRAFT_04g027860 [Sorghum bicolor] |
| RefSeq | XP_002452900.1 | 0 | 23 | 560 | 29 | 578 | hypothetical protein SORBIDRAFT_04g034610 [Sorghum bicolor] |
| RefSeq | XP_002452901.1 | 0 | 23 | 560 | 41 | 585 | hypothetical protein SORBIDRAFT_04g034620 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 55 | 538 | 19 | 521 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 1asq_A | 0 | 55 | 538 | 19 | 521 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 1asp_B | 0 | 55 | 538 | 19 | 521 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 1asp_A | 0 | 55 | 538 | 19 | 521 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 1aso_B | 0 | 55 | 538 | 19 | 521 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
