| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb05g026810.1 |
| Family | GH1 |
| Protein Properties | Length: 655 Molecular Weight: 73706 Isoelectric Point: 7.0524 |
| Chromosome | Chromosome/Scaffold: 5 Start: 60756376 End: 60766833 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH1 | 183 | 554 | 0 |
| WHNVPCPQERLKFWSDPDTELKLAKETGISVFRLGIDWTRVMPKAPTEESKSSVNFAALERYRWIIQRVHEYGMKVMLTLFHHSLPPWAGEYGGWRMEKT VKYFMDFVRLVVDRVSDLVDYWVVFNEPHVFVMLTYCAGAWPGGDPNAIEVATSALPTGVYNQALHWMAIAHAEAYDYIHSESKSKRKPFVGVAHHVSFT RPYGLFDVAAVTLANSLTLFPYVDSICDKLDFIGINYYGQEVISGPGLKLVDNDEYSESGRGVYPDGLFRILIQFNERYKSLNIPFIITENGVSDETDLI RKPYILEHLLAIYAAIIMGVPVLGYLFWTMSDNWEWADGYGPKFGLVAVDRANNLARKPRPSYYLFSKVVTT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 655 Download |
| MPLPAFLAAA ARLAVLVAAA VTAANAASFA RYRRRHLRRI PNPIDESADP IADFRALPSN 60 SAAASAGEDV AEDGNFFFGL ATAPAHVEDR LEDAWLQFAV EHSCDDKEAM RDHKTADAVM 120 ASAAGDGGAQ LASRSRGDEK AVDGEKRKPL KVAMEAMLRG FEMFAYGGEA GSGDNCSHNV 180 AAWHNVPCPQ ERLKFWSDPD TELKLAKETG ISVFRLGIDW TRVMPKAPTE ESKSSVNFAA 240 LERYRWIIQR VHEYGMKVML TLFHHSLPPW AGEYGGWRME KTVKYFMDFV RLVVDRVSDL 300 VDYWVVFNEP HVFVMLTYCA GAWPGGDPNA IEVATSALPT GVYNQALHWM AIAHAEAYDY 360 IHSESKSKRK PFVGVAHHVS FTRPYGLFDV AAVTLANSLT LFPYVDSICD KLDFIGINYY 420 GQEVISGPGL KLVDNDEYSE SGRGVYPDGL FRILIQFNER YKSLNIPFII TENGVSDETD 480 LIRKPYILEH LLAIYAAIIM GVPVLGYLFW TMSDNWEWAD GYGPKFGLVA VDRANNLARK 540 PRPSYYLFSK VVTTGKITRQ DRLGAWRELQ QAAFQKKTRP FFRAVDKHGR MYAGGLDRPI 600 QRPFILRDWR FGHYEMEGLQ DPFSRFIRSI FSPILRKKKI HYIEYEDISY AISP* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02814 | PLN02814 | 8.0e-20 | 202 | 569 | 425 | + beta-glucosidase | ||
| PRK13511 | PRK13511 | 5.0e-24 | 202 | 557 | 438 | + 6-phospho-beta-galactosidase; Provisional | ||
| TIGR03356 | BGL | 8.0e-48 | 203 | 548 | 392 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 5.0e-49 | 200 | 554 | 411 | + Glycosyl hydrolase family 1. | ||
| COG2723 | BglB | 8.0e-60 | 203 | 558 | 412 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG27984.1 | 0 | 28 | 653 | 28 | 656 | SFR2 [Zea mays] |
| GenBank | ACL54550.1 | 0 | 28 | 653 | 28 | 655 | unknown [Zea mays] |
| GenBank | EAY81793.1 | 0 | 40 | 653 | 40 | 646 | hypothetical protein OsI_36965 [Oryza sativa Indica Group] |
| RefSeq | NP_001068463.1 | 0 | 40 | 653 | 40 | 647 | Os11g0683500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001105868.1 | 0 | 28 | 653 | 28 | 657 | putative beta-glycosidase [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ta9_B | 3e-40 | 202 | 557 | 71 | 455 | A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii |
| PDB | 3ta9_A | 3e-40 | 202 | 557 | 71 | 455 | A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii |
| PDB | 1vff_A | 5e-38 | 172 | 557 | 42 | 408 | A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii |
| PDB | 3apg_D | 1e-37 | 188 | 560 | 51 | 460 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
| PDB | 3apg_C | 1e-37 | 188 | 560 | 51 | 460 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
