| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb06g000430.1 |
| Family | GT43 |
| Protein Properties | Length: 386 Molecular Weight: 43357.6 Isoelectric Point: 9.7652 |
| Chromosome | Chromosome/Scaffold: 6 Start: 454965 End: 458578 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT43 | 146 | 359 | 0 |
| MGHTLRLVDPPVLWLVVEAGKPTPEAAATLRGTTVMHRYVGCCDKLNASSVDDDRLRLRPHQMNAALELIENHRLDGIVYFADEEGVYSLDLFKRLRQVR RFGTWPVPVISENRKDGVVLEGPVCKQNQVVGWHTSEHASKLRRFHVAMSGFAFNSTMLWDPKLRSHLAWNSIRHPDTEKEGFQVTTFIEQLVEDESQME GIPADCSQIMNWHV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 386 Download |
| MASIRRPHSP AKQHLLRHHH PFATSSPPSS PLRHSSSSPR THHHLAAAAA AGGYPHPFLF 60 FTRRPLPRFA AFFLLGSFLG LLHFLSHLPH QTPHLRPSTS PNNPTTAAVL PIVRLHDDDD 120 ATTNKLLVIV TPTRARAAQA YYLSRMGHTL RLVDPPVLWL VVEAGKPTPE AAATLRGTTV 180 MHRYVGCCDK LNASSVDDDR LRLRPHQMNA ALELIENHRL DGIVYFADEE GVYSLDLFKR 240 LRQVRRFGTW PVPVISENRK DGVVLEGPVC KQNQVVGWHT SEHASKLRRF HVAMSGFAFN 300 STMLWDPKLR SHLAWNSIRH PDTEKEGFQV TTFIEQLVED ESQMEGIPAD CSQIMNWHVP 360 FGSENLAYPK GWRVPTNLDV VIPLK* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02458 | PLN02458 | 4.0e-52 | 125 | 361 | 241 | + transferase, transferring glycosyl groups | ||
| pfam03360 | Glyco_transf_43 | 3.0e-56 | 146 | 358 | 222 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 9.0e-74 | 125 | 358 | 241 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN34753.1 | 0 | 1 | 334 | 1 | 340 | unknown [Zea mays] |
| EMBL | CAE12013.1 | 0 | 118 | 385 | 12 | 276 | beta3-glucuronyltransferase [Hordeum vulgare] |
| EMBL | CAH65757.1 | 0 | 1 | 385 | 1 | 381 | OSIGBa0123D13.6 [Oryza sativa (indica cultivar-group)] |
| RefSeq | NP_001131482.1 | 0 | 1 | 385 | 1 | 387 | hypothetical protein LOC100192819 [Zea mays] |
| RefSeq | XP_002446005.1 | 0 | 1 | 385 | 1 | 385 | hypothetical protein SORBIDRAFT_06g000430 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v84_B | 4e-21 | 129 | 358 | 7 | 230 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 1v84_A | 4e-21 | 129 | 358 | 7 | 230 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 1v83_B | 4e-21 | 129 | 358 | 7 | 230 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 1v83_A | 4e-21 | 129 | 358 | 7 | 230 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 1v82_B | 4e-21 | 129 | 358 | 7 | 230 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
