| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb06g000490.1 |
| Family | AA2 |
| Protein Properties | Length: 338 Molecular Weight: 36379.1 Isoelectric Point: 4.5749 |
| Chromosome | Chromosome/Scaffold: 6 Start: 509490 End: 510504 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 61 | 318 | 0 |
| TDPTLSPAIIRMLLHDCFVRGCDASVMIVPTPPLHHPATSSERTAVPNHTLRGFTAVDAVNARSTTRAAAVVSCADVLALMARDAVVLLGGARYDVALGR RDGTVSNPDEVDLPAPFAKLADVLDYFAARGFSAEETVVLFGAHTVGGAHCSSFRYRLTGGPGDGTMDETLRRDMLDECGAEELPLETDPAVFFDPDSPF AVDNNFYRQLMSNRTLLQVDQEAAVNPSTAPHVAYYAANPDAFVRRFSEVMAKLSNVG | |||
| Full Sequence |
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| Protein Sequence Length: 338 Download |
| MTNGRRDNNL LGVLLLVQRQ DLQLPPMAAI VVDALDAGYY ATTCPDAEAI VEDAMSRLHY 60 TDPTLSPAII RMLLHDCFVR GCDASVMIVP TPPLHHPATS SERTAVPNHT LRGFTAVDAV 120 NARSTTRAAA VVSCADVLAL MARDAVVLLG GARYDVALGR RDGTVSNPDE VDLPAPFAKL 180 ADVLDYFAAR GFSAEETVVL FGAHTVGGAH CSSFRYRLTG GPGDGTMDET LRRDMLDECG 240 AEELPLETDP AVFFDPDSPF AVDNNFYRQL MSNRTLLQVD QEAAVNPSTA PHVAYYAANP 300 DAFVRRFSEV MAKLSNVGVL EGDAGEVRKL CSRYNDT* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00141 | peroxidase | 0.005 | 268 | 299 | 32 | + Peroxidase. | ||
| cd00314 | plant_peroxidase_like | 1.0e-21 | 51 | 316 | 299 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
| pfam00141 | peroxidase | 1.0e-49 | 51 | 206 | 158 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 4.0e-61 | 38 | 335 | 310 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 3.0e-123 | 35 | 334 | 305 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAE02755.2 | 0 | 55 | 335 | 1 | 277 | OSJNBb0085F13.2 [Oryza sativa (japonica cultivar-group)] |
| EMBL | CAH69294.1 | 0 | 36 | 335 | 34 | 329 | TPA: class III peroxidase 52 precursor [Oryza sativa (japonica cultivar-group)] |
| GenBank | EAY73370.1 | 0 | 12 | 337 | 7 | 324 | hypothetical protein OsI_01248 [Oryza sativa Indica Group] |
| GenBank | EEE60376.1 | 0 | 55 | 335 | 1 | 277 | hypothetical protein OsJ_13514 [Oryza sativa Japonica Group] |
| RefSeq | XP_002446011.1 | 0 | 1 | 337 | 1 | 337 | hypothetical protein SORBIDRAFT_06g000490 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1sch_B | 0 | 35 | 335 | 2 | 294 | A Chain A, Peanut Peroxidase |
| PDB | 1sch_A | 0 | 35 | 335 | 2 | 294 | A Chain A, Peanut Peroxidase |
| PDB | 1qo4_A | 0 | 35 | 335 | 3 | 304 | A Chain A, Peanut Peroxidase |
| PDB | 1pa2_A | 0 | 35 | 335 | 3 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 3hdl_A | 0 | 35 | 336 | 2 | 304 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GE481321 | 274 | 34 | 297 | 0 |
| DV984490 | 274 | 34 | 297 | 0 |
| GW887665 | 253 | 35 | 287 | 0 |
| DV168767 | 272 | 35 | 300 | 0 |
| EX408365 | 291 | 37 | 318 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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