| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb06g001270.2 |
| Family | GT1 |
| Protein Properties | Length: 530 Molecular Weight: 57390.9 Isoelectric Point: 6.9519 |
| Chromosome | Chromosome/Scaffold: 6 Start: 1828896 End: 1841084 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT1 | 174 | 500 | 2.7e-34 |
| GDVQPFVAIGKRLQDYGHRVRLATHANFKEFVLTAGLEFFPLGGDPKVLAEYMVKNKGFLPSGPSEIPIQRKQMKDIIFSLLPACKEPDPDTGIPFKVDA IIANPPAYGHTHVAEALKVPIHIFFTMPWTPTSEFPHPLSRVKQPAGYRLSYQIVDSMIWLGIRDMINEFRKKKLKLRPVTYLSGSQGSGNDIPHGYIWS PHLVPKPKDWGPKIDVVGFCFLDLASNYVPPEPLVKWLEAGDKPIYVGFGSLPVQDPQKMTEIIVKALEITGQRGIINKGWGGLGTLAEPKDFVYLLDNC PHDWLFLQCKAVVHHGGAGTTAAGLKA | |||
| Full Sequence |
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| Protein Sequence Length: 530 Download |
| MAAGEESGSG VAGGREGGEA PAASAPNGDR SGNSPLATAP SSSSADDRGF HRSSTMPGVI 60 KNDEITNETA GPSNLERSRT ERRRQNNPAD DPAKQLLDER IPIKKKLKML NRIATVKDDG 120 TVVVDVPSGL EEPTIVGGTE DIYAEATVEE ALDGTEIPYR PPMQIVILIV GTRGDVQPFV 180 AIGKRLQDYG HRVRLATHAN FKEFVLTAGL EFFPLGGDPK VLAEYMVKNK GFLPSGPSEI 240 PIQRKQMKDI IFSLLPACKE PDPDTGIPFK VDAIIANPPA YGHTHVAEAL KVPIHIFFTM 300 PWTPTSEFPH PLSRVKQPAG YRLSYQIVDS MIWLGIRDMI NEFRKKKLKL RPVTYLSGSQ 360 GSGNDIPHGY IWSPHLVPKP KDWGPKIDVV GFCFLDLASN YVPPEPLVKW LEAGDKPIYV 420 GFGSLPVQDP QKMTEIIVKA LEITGQRGII NKGWGGLGTL AEPKDFVYLL DNCPHDWLFL 480 QCKAVVHHGG AGTTAAGLKA ASVICSVLRL LYLSLVTNLS GGIGCMQEG* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1819 | COG1819 | 1.0e-17 | 162 | 482 | 328 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| pfam03033 | Glyco_transf_28 | 4.0e-37 | 165 | 309 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| cd03784 | GT1_Gtf_like | 5.0e-93 | 163 | 482 | 324 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB06081.1 | 0 | 1 | 501 | 1 | 498 | UDP-glucose:sterol glucosyltransferase [Avena sativa] |
| GenBank | EEC76698.1 | 0 | 1 | 501 | 1 | 501 | hypothetical protein OsI_14701 [Oryza sativa Indica Group] |
| GenBank | EEE60430.1 | 0 | 1 | 501 | 1 | 501 | hypothetical protein OsJ_13635 [Oryza sativa Japonica Group] |
| RefSeq | NP_001052094.1 | 0 | 1 | 501 | 1 | 501 | Os04g0131900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151796.1 | 0 | 3 | 501 | 2 | 496 | LOC100285431 [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 2e-20 | 163 | 502 | 1 | 305 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 3h4i_A | 2e-20 | 163 | 502 | 1 | 305 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1rrv_B | 0.000000000000003 | 163 | 500 | 1 | 321 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 0.000000000000003 | 163 | 500 | 1 | 321 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1pnv_B | 0.00000000000003 | 163 | 500 | 1 | 305 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GT046352 | 358 | 172 | 529 | 0 |
| GO883166 | 332 | 127 | 458 | 0 |
| FL856100 | 274 | 199 | 472 | 0 |
| JG877720 | 281 | 175 | 455 | 0 |
| FL805957 | 251 | 233 | 483 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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