| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb06g015590.1 |
| Family | GH17 |
| Protein Properties | Length: 411 Molecular Weight: 44575 Isoelectric Point: 5.435 |
| Chromosome | Chromosome/Scaffold: 6 Start: 43204946 End: 43209761 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 45 | 372 | 0 |
| IGINYGQIGDNLPSPSRVSYLLQSMQVSKVKLYDADPYVLSAFLDTDVEFVVGIGNENVSAMAADPSAARAWVQRHVQPYLLATGDGGTRRRRITCITVG NEVLKGNDTSLKAALLPAMESVYAALSALGLQGRVNVTTAHSLDIMGTTYPPSAGAFAPDVVPYVQPLLSFLSMARSPFLINCYPYFAYKADPGNVPLEY VLFQPNAGVTDANTRLNYDNMLYAQVDSVYAAIQALGHAADDIDVKISETGWPSRGDPDEAGATPEYAGTYIGNLLRRIEMKQGTPLRPAVPIDVYVFAL FNENLKPGPASERNYGLFYPDGTPVYNV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 411 Download |
| MAVAERFGAP WPPSRFFFFF VAVLLVLLLT DGGVSWIRRA EALSIGINYG QIGDNLPSPS 60 RVSYLLQSMQ VSKVKLYDAD PYVLSAFLDT DVEFVVGIGN ENVSAMAADP SAARAWVQRH 120 VQPYLLATGD GGTRRRRITC ITVGNEVLKG NDTSLKAALL PAMESVYAAL SALGLQGRVN 180 VTTAHSLDIM GTTYPPSAGA FAPDVVPYVQ PLLSFLSMAR SPFLINCYPY FAYKADPGNV 240 PLEYVLFQPN AGVTDANTRL NYDNMLYAQV DSVYAAIQAL GHAADDIDVK ISETGWPSRG 300 DPDEAGATPE YAGTYIGNLL RRIEMKQGTP LRPAVPIDVY VFALFNENLK PGPASERNYG 360 LFYPDGTPVY NVGLRGYLPP MDFSQGTRRK AVRLFAFILI AIASITLSLS * 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0008 | 145 | 365 | 225 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-88 | 45 | 372 | 328 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAD40655.2 | 0 | 1 | 389 | 1 | 375 | OSJNBa0073L04.8 [Oryza sativa (japonica cultivar-group)] |
| EMBL | CAH67163.1 | 0 | 1 | 410 | 1 | 393 | H0717B12.10 [Oryza sativa (indica cultivar-group)] |
| GenBank | EAZ30671.1 | 0 | 1 | 389 | 1 | 375 | hypothetical protein OsJ_14727 [Oryza sativa Japonica Group] |
| RefSeq | NP_001052739.1 | 0 | 1 | 410 | 1 | 393 | Os04g0412300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002446413.1 | 0 | 1 | 410 | 1 | 410 | hypothetical protein SORBIDRAFT_06g015590 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 45 | 374 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 45 | 374 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 45 | 374 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 45 | 374 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 45 | 374 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
