CAZyme Information

Basic Information
SpeciesSorghum bicolor
Cazyme IDSb06g015880.1
FamilyGH16
Protein PropertiesLength: 281 Molecular Weight: 30831.4 Isoelectric Point: 4.6888
ChromosomeChromosome/Scaffold: 6 Start: 43936495 End: 43937960
DescriptionXyloglucan endotransglucosylase/hydrolase family protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH16402073.5e-27
  RTNYDESGAQVAMLNLDRSSGAGFNSKEQYLYGQFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGNATGQPVVLNTNVWANGDGKKEHQFDLW
  FDPAADYHTYTIIWNPTNILFKVDDNVIRVFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDW
Full Sequence
Protein Sequence     Length: 281     Download
MARRSLALLL ASSLALVMMA AVASADSWLY EKFSTDGTVR TNYDESGAQV AMLNLDRSSG    60
AGFNSKEQYL YGQFSVQMKL IPGNSAGTVS CFYLSSGDGD GHDEIDMEFM GNATGQPVVL    120
NTNVWANGDG KKEHQFDLWF DPAADYHTYT IIWNPTNILF KVDDNVIRVF KRYADLAYPS    180
SKPMTLHATL WDGSYWATEK GKVPIDWSGA PFVVSYKGYS ADACVSGGAC AAGSGAWMNK    240
QPDSAEWGTV KWAESNYMRY NYCDDGWRFP QGLPAECSRS * 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd02183GH16_fungal_CRH1_transglycosylase8.0e-1741217189+
cd02175GH16_lichenase2.0e-1959194138+
pfam00722Glyco_hydro_161.0e-6449209162+
PLN03161PLN031612.0e-6553279239+
cd02176GH16_XET7.0e-11130277258+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005618cell wall
GO:0005975carbohydrate metabolic process
GO:0006073cellular glucan metabolic process
GO:0016762xyloglucan:xyloglucosyl transferase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACG37530.102628025280xyloglucan endotransglycosylase/hydrolase protein 8 precursor [Zea mays]
GenBankACN28585.102628025280unknown [Zea mays]
RefSeqNP_001105166.102628025280xyloglucan endo-transglycosylase/hydrolase [Zea mays]
RefSeqXP_002446422.1012801280hypothetical protein SORBIDRAFT_06g015880 [Sorghum bicolor]
RefSeqXP_002446425.102427920276hypothetical protein SORBIDRAFT_06g015930 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1un1_B04627934274A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome
PDB1un1_A04627934274A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome
PDB1umz_B04627934274A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB1umz_A04627934274A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB2vh9_B05527767290A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide
Transmembrane Domains
StartEnd
729
Signal Peptide
Cleavage Site
25
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EE047776257262810
EC901295257262810
EE157049257262810
EE154499257262810
EE046191245262690
Orthologous Group
SpeciesID
Brachypodium distachyonBradi1g09690.1Bradi1g09700.1Bradi3g18590.1Bradi3g18600.1Bradi5g20718.1
Oryza sativaLOC_Os08g13920.1
Panicum virgatumPavirv00014997mPavirv00060809mPavirv00011489mPavirv00022766mPavirv00032512m
Pavirv00011651mPavirv00065073mPavirv00039266mPavirv00018963mPavirv00059833m
Setaria italicaSi014242mSi014194mSi014232mSi014215mSi014233m
Sorghum bicolorSb06g015930.1Sb06g015940.1Sb07g009410.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny