CAZyme Information

Basic Information
SpeciesSorghum bicolor
Cazyme IDSb06g015930.1
FamilyGH16
Protein PropertiesLength: 278 Molecular Weight: 30900.6 Isoelectric Point: 6.392
ChromosomeChromosome/Scaffold: 6 Start: 44077227 End: 44078497
Descriptionxyloglucan endotransglucosylase/hydrolase 13
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH16492041.3e-25
  LSLDQHSGAAGFNSKEQYLYGEFSIEMKLIRGNSAGTVSCFYLSSGDGDGHDEIDMEFMGNATGQPVVLNTNVWANGDGKKEHQFDLWFDPAADYHTYTI
  IWNPTNILFKVDNLFIRSFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKMPIDW
Full Sequence
Protein Sequence     Length: 278     Download
MAPRSLGVLA VALALLQAAS AKSWLGAKFT TDGTVREGYD SSGQQVVMLS LDQHSGAAGF    60
NSKEQYLYGE FSIEMKLIRG NSAGTVSCFY LSSGDGDGHD EIDMEFMGNA TGQPVVLNTN    120
VWANGDGKKE HQFDLWFDPA ADYHTYTIIW NPTNILFKVD NLFIRSFKRY ADLAYPSSKP    180
MTLHATLWDG SYWATEKGKM PIDWSGAPFV VSYRSYAANA CVSGGACRTG RDGWMHRQLD    240
NAEWGTVRWA EKNFMRYNYC QDGWRFPQGL PAECSRH* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam06955XET_C5.0e-1622727451+
cd02175GH16_lichenase2.0e-1949161121+
pfam00722Glyco_hydro_169.0e-6341206167+
PLN03161PLN031614.0e-7049276240+
cd02176GH16_XET3.0e-11641274244+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005618cell wall
GO:0005975carbohydrate metabolic process
GO:0006073cellular glucan metabolic process
GO:0016762xyloglucan:xyloglucosyl transferase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACG38167.1012771281xyloglucan endotransglycosylase/hydrolase protein 8 precursor [Zea mays]
GenBankACN31920.102327726281unknown [Zea mays]
RefSeqNP_001105166.102327626279xyloglucan endo-transglycosylase/hydrolase [Zea mays]
RefSeqXP_002446422.102327627279hypothetical protein SORBIDRAFT_06g015880 [Sorghum bicolor]
RefSeqXP_002446425.1012771277hypothetical protein SORBIDRAFT_06g015930 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1un1_B04227634274A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide
PDB1un1_A04227634274A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide
PDB1umz_B04227634274A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB1umz_A04227634274A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB2uwb_B04427437267A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
Signal Peptide
Cleavage Site
21
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DV508848252282780
EE287470252282780
CN14004324612460
DT943397243282690
EB401066244282700
Orthologous Group
SpeciesID
Brachypodium distachyonBradi1g09690.1Bradi1g09700.1Bradi3g18590.1Bradi3g18600.1Bradi5g20718.1
Oryza sativaLOC_Os08g13920.1
Panicum virgatumPavirv00014997mPavirv00060809mPavirv00011489mPavirv00022766mPavirv00032512m
Pavirv00011651mPavirv00065073mPavirv00039266mPavirv00018963mPavirv00059833m
Setaria italicaSi014242mSi014194mSi014232mSi014215mSi014233m
Sorghum bicolorSb06g015880.1Sb06g015940.1Sb07g009410.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny