| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb06g017600.1 |
| Family | GH9 |
| Protein Properties | Length: 516 Molecular Weight: 55351.2 Isoelectric Point: 8.3909 |
| Chromosome | Chromosome/Scaffold: 6 Start: 47001810 End: 47003686 |
| Description | cellulase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 51 | 507 | 0 |
| DYADALAKAILFFQGQRSGQLPPDQAVTWRSNSGLSDGSAANVDLTGGYYDGGDNAKFGFPMAFTTTMLSWSVLEHGGKMKAARVVHDARAAVRWGADYL LKAATQTPGTLYVGVGDPDADHRCWERPEDMDTPRTVYAVSASAPGSDVAGETAAALAAASLVFRAADRAYSRRLLAAARAVMELAVLHQGKYSDFVGGN IGAYYQSYSGYKDELLWGSAWLLWATKNSSYLGYLYSLGDIDRSVDMFSWDNKLAGARVLLSRRALVNGDKRLEPFRQQAEDFFCRILRDSPSSTTQYTA GGLMHKSGNANLQYVTSASFLLTTYAKYMAVTKHAFACGSLSVTARSLRALAKQQVDYILGANAKGMSYMVNFGARWPQRIHHRASSLPPVAAHPAHIGC QEGFQSYFYASAANPNVHTGAVVGGPDEHEEFPDDRADYARSEPTTYTNAPLVGCLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 516 Download |
| MMSSALSNQA ALAARSRTMP SPSSSQVLVL LAVAVSLLSG SSYVAAGGHP DYADALAKAI 60 LFFQGQRSGQ LPPDQAVTWR SNSGLSDGSA ANVDLTGGYY DGGDNAKFGF PMAFTTTMLS 120 WSVLEHGGKM KAARVVHDAR AAVRWGADYL LKAATQTPGT LYVGVGDPDA DHRCWERPED 180 MDTPRTVYAV SASAPGSDVA GETAAALAAA SLVFRAADRA YSRRLLAAAR AVMELAVLHQ 240 GKYSDFVGGN IGAYYQSYSG YKDELLWGSA WLLWATKNSS YLGYLYSLGD IDRSVDMFSW 300 DNKLAGARVL LSRRALVNGD KRLEPFRQQA EDFFCRILRD SPSSTTQYTA GGLMHKSGNA 360 NLQYVTSASF LLTTYAKYMA VTKHAFACGS LSVTARSLRA LAKQQVDYIL GANAKGMSYM 420 VNFGARWPQR IHHRASSLPP VAAHPAHIGC QEGFQSYFYA SAANPNVHTG AVVGGPDEHE 480 EFPDDRADYA RSEPTTYTNA PLVGCLAYLA GTYRS* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02613 | PLN02613 | 1.0e-157 | 48 | 511 | 465 | + endoglucanase | ||
| PLN03009 | PLN03009 | 2.0e-160 | 51 | 510 | 465 | + cellulase | ||
| PLN02308 | PLN02308 | 1.0e-166 | 47 | 510 | 468 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 51 | 513 | 466 | + endoglucanase | ||
| PLN02175 | PLN02175 | 0 | 50 | 511 | 462 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAE01493.1 | 0 | 48 | 515 | 35 | 500 | P0041A24.5 [Oryza sativa (japonica cultivar-group)] |
| EMBL | CBI17038.1 | 0 | 48 | 515 | 30 | 494 | unnamed protein product [Vitis vinifera] |
| GenBank | EEC75164.1 | 0 | 38 | 515 | 32 | 509 | hypothetical protein OsI_11382 [Oryza sativa Indica Group] |
| RefSeq | NP_001052888.1 | 0 | 48 | 515 | 38 | 503 | Os04g0443300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002447897.1 | 0 | 1 | 515 | 1 | 515 | hypothetical protein SORBIDRAFT_06g017600 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 51 | 509 | 4 | 428 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1ksc_A | 0 | 51 | 509 | 4 | 428 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1ks8_A | 0 | 51 | 509 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 51 | 513 | 5 | 444 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 51 | 513 | 5 | 444 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
