| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb06g019830.1 |
| Family | GH1 |
| Protein Properties | Length: 449 Molecular Weight: 51293 Isoelectric Point: 7.5982 |
| Chromosome | Chromosome/Scaffold: 6 Start: 49402867 End: 49406567 |
| Description | beta glucosidase 13 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 6 | 445 | 0 |
| DKFLVLADRIANRSNGDVAVNSYHLYKEDVRLMKDMGMDAYRFSISWTRILPNGSLSGGVNREGVRYYNNLINELLSKGLQPFVTLFHWDSPQALEDKYG GFLSPNIINDYKDYSEVCFKEFGDRVKHWITFNEPWTFCSVGYASGTFPPARCSSWEEGKCNVGDSGREPYTACHYQMLAHAETVRLYKEKYQGVQKGKI GITIVSHWFTPFSQSRSDIDAARRAVDFMLGWSLDPLIRGDYPLSMKRLVGNRLPQFTKEQSKLVKGAFDFIGLNYYTGYYTEDVPPSLNKSYNTDAQAN TTGVRGGLPIGRQAASPSLYIYPQGFLELLLHVKENYGNPTIYITENGVDEATNNSLPLQEALKDDIRIEYYHKHLLALSSAIRAGANVKGYFAWSLLDN FEWRDAFTVRFGINFVDYNDGLKRYPKNSAHWFREILQKN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 449 Download |
| MFEIFDKFLV LADRIANRSN GDVAVNSYHL YKEDVRLMKD MGMDAYRFSI SWTRILPNGS 60 LSGGVNREGV RYYNNLINEL LSKGLQPFVT LFHWDSPQAL EDKYGGFLSP NIINDYKDYS 120 EVCFKEFGDR VKHWITFNEP WTFCSVGYAS GTFPPARCSS WEEGKCNVGD SGREPYTACH 180 YQMLAHAETV RLYKEKYQGV QKGKIGITIV SHWFTPFSQS RSDIDAARRA VDFMLGWSLD 240 PLIRGDYPLS MKRLVGNRLP QFTKEQSKLV KGAFDFIGLN YYTGYYTEDV PPSLNKSYNT 300 DAQANTTGVR GGLPIGRQAA SPSLYIYPQG FLELLLHVKE NYGNPTIYIT ENGVDEATNN 360 SLPLQEALKD DIRIEYYHKH LLALSSAIRA GANVKGYFAW SLLDNFEWRD AFTVRFGINF 420 VDYNDGLKRY PKNSAHWFRE ILQKNVLL* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02849 | PLN02849 | 5.0e-126 | 17 | 445 | 435 | + beta-glucosidase | ||
| PLN02998 | PLN02998 | 2.0e-126 | 21 | 443 | 427 | + beta-glucosidase | ||
| COG2723 | BglB | 1.0e-131 | 12 | 445 | 443 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| TIGR03356 | BGL | 5.0e-137 | 4 | 438 | 441 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 1.0e-169 | 4 | 445 | 450 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAH66812.1 | 0 | 13 | 444 | 77 | 510 | OSIGBa0135C13.7 [Oryza sativa (indica cultivar-group)] |
| EMBL | CAH67305.1 | 0 | 13 | 444 | 73 | 506 | OSIGBa0106G07.1 [Oryza sativa (indica cultivar-group)] |
| Swiss-Prot | Q7XKV4 | 0 | 13 | 444 | 77 | 510 | BGL12_ORYSJ RecName: Full=Beta-glucosidase 12; Short=Os4bglu12; Flags: Precursor |
| RefSeq | XP_002448026.1 | 0 | 1 | 448 | 1 | 448 | hypothetical protein SORBIDRAFT_06g019830 [Sorghum bicolor] |
| RefSeq | XP_002448027.1 | 0 | 13 | 444 | 79 | 512 | hypothetical protein SORBIDRAFT_06g019840 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ptq_B | 0 | 13 | 444 | 72 | 505 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 3ptq_A | 0 | 13 | 444 | 72 | 505 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 3ptm_B | 0 | 13 | 444 | 72 | 505 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 3ptm_A | 0 | 13 | 444 | 72 | 505 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 3ptk_B | 0 | 13 | 444 | 72 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EE590590 | 416 | 31 | 444 | 0 |
| CB677500 | 249 | 13 | 261 | 0 |
| HO779715 | 421 | 13 | 432 | 0 |
| HO794849 | 421 | 13 | 432 | 0 |
| FG227815 | 432 | 13 | 443 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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