y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb06g019860.1 |
Family | GH1 |
Protein Properties | Length: 486 Molecular Weight: 54718.5 Isoelectric Point: 6.5887 |
Chromosome | Chromosome/Scaffold: 6 Start: 49435689 End: 49439745 |
Description | beta glucosidase 13 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 34 | 484 | 0 |
RRSFPEGFIFGTASSAYQYEGGAMEGGRGPSIWDTFTHQHPGRFMIQDKIADRSNGDVAVDSYHLYKEDVRIMKGMGMDAYRFSISWSRILPNGSLSGGV NREGIRYYNNLIDELLLKGIQPFVTLFHWDTPQALEDKYGGFLSSSIINDYKDYAEVCFKEFGDRVKHWITFNEPWSFCSSGYASGTIAPGRCSPWEQGK CSAGDSGTEPYTVCHHQILAHAETVRLYKEKYQVEQKGNIGITLVSQWFMDPLTRGEYPLSMRALVGNRLPQFTKEQSELVKGAFDFIGLNYYTTNYADN LPQSNGLNVSYSTDARFRNGVPIGPQAASSWLFIYPRGFRELLLYVKENYGNPTVYITENGVDEANNKNLSLEEALKDNTRIEFYHTHLLALQSAIRDGA NVKGYFPWSLLDNFEWANGYTVRFGINFVEYNDGLKRYPKSSAHWFTEFLK |
Full Sequence |
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Protein Sequence Length: 486 Download |
MLARLLPLLL LLAAAAAASN ASYDGAAGQP PISRRSFPEG FIFGTASSAY QYEGGAMEGG 60 RGPSIWDTFT HQHPGRFMIQ DKIADRSNGD VAVDSYHLYK EDVRIMKGMG MDAYRFSISW 120 SRILPNGSLS GGVNREGIRY YNNLIDELLL KGIQPFVTLF HWDTPQALED KYGGFLSSSI 180 INDYKDYAEV CFKEFGDRVK HWITFNEPWS FCSSGYASGT IAPGRCSPWE QGKCSAGDSG 240 TEPYTVCHHQ ILAHAETVRL YKEKYQVEQK GNIGITLVSQ WFMDPLTRGE YPLSMRALVG 300 NRLPQFTKEQ SELVKGAFDF IGLNYYTTNY ADNLPQSNGL NVSYSTDARF RNGVPIGPQA 360 ASSWLFIYPR GFRELLLYVK ENYGNPTVYI TENGVDEANN KNLSLEEALK DNTRIEFYHT 420 HLLALQSAIR DGANVKGYFP WSLLDNFEWA NGYTVRFGIN FVEYNDGLKR YPKSSAHWFT 480 EFLKK* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 9.0e-135 | 33 | 484 | 482 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 1.0e-135 | 33 | 484 | 481 | + beta-glucosidase | ||
COG2723 | BglB | 1.0e-141 | 37 | 479 | 477 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 6.0e-159 | 38 | 479 | 473 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 0 | 36 | 485 | 478 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAH66812.1 | 0 | 26 | 485 | 28 | 510 | OSIGBa0135C13.7 [Oryza sativa (indica cultivar-group)] |
Swiss-Prot | Q7XKV4 | 0 | 20 | 485 | 23 | 510 | BGL12_ORYSJ RecName: Full=Beta-glucosidase 12; Short=Os4bglu12; Flags: Precursor |
RefSeq | XP_002448027.1 | 0 | 16 | 485 | 22 | 512 | hypothetical protein SORBIDRAFT_06g019840 [Sorghum bicolor] |
RefSeq | XP_002448028.1 | 0 | 24 | 485 | 23 | 517 | hypothetical protein SORBIDRAFT_06g019850 [Sorghum bicolor] |
RefSeq | XP_002448029.1 | 0 | 1 | 485 | 1 | 485 | hypothetical protein SORBIDRAFT_06g019860 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 10 | 485 | 8 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptq_A | 0 | 10 | 485 | 8 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptm_B | 0 | 10 | 485 | 8 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptm_A | 0 | 10 | 485 | 8 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptk_B | 0 | 10 | 485 | 8 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |