| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb06g020260.1 |
| Family | GH5 |
| Protein Properties | Length: 557 Molecular Weight: 60948.9 Isoelectric Point: 6.3913 |
| Chromosome | Chromosome/Scaffold: 6 Start: 49766544 End: 49771176 |
| Description | Cellulase (glycosyl hydrolase family 5) protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 37 | 349 | 9.1e-40 |
| IVGADGRRVKLACATWASHLEPAAAEGLARRGVSDIAARVAAMGFNCVRLTWPTYLATNVTLASLPLRWSLERLGMLESVAGVRVNNPALLDLPLVDVFR EVVSSLASKGIMVILDNQMTTPGWCCSRIDGNGFFGDVYFDPDEWLKGLSAMATMFNNTKNVVGMSLRNELRGPKQNVSLWYRYMQMGAEAVHAANPNVL VILSGLDFDNTLSFLFKEKVHLSFSGKLVYEQHWYGFSDGGNWETQNQNDVCAMVVDFIWAKGLFLLQQGWPLFFSEFGFDMSGTHIGDNRYLTCFLSVA AEMDLDWSIWALQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 557 Download |
| MAASTSPLLL LALLLLPALT AAASLPALPL STASRWIVGA DGRRVKLACA TWASHLEPAA 60 AEGLARRGVS DIAARVAAMG FNCVRLTWPT YLATNVTLAS LPLRWSLERL GMLESVAGVR 120 VNNPALLDLP LVDVFREVVS SLASKGIMVI LDNQMTTPGW CCSRIDGNGF FGDVYFDPDE 180 WLKGLSAMAT MFNNTKNVVG MSLRNELRGP KQNVSLWYRY MQMGAEAVHA ANPNVLVILS 240 GLDFDNTLSF LFKEKVHLSF SGKLVYEQHW YGFSDGGNWE TQNQNDVCAM VVDFIWAKGL 300 FLLQQGWPLF FSEFGFDMSG THIGDNRYLT CFLSVAAEMD LDWSIWALQG SYYIREGILA 360 YDESYGLLSW DWCTARNPSF IKRINSLQSP FQGPGLPNSQ EPYNIIFHPQ SGLCVLARSS 420 KLLELGPCDE SNAWNYTSAY NLVVKNTGQC LQVKSVGKNA KLGTDCSKPS SKWNLISNSK 480 MHVSAELTKN GTRVCLDASP AGAIITNQCK CLSVDPTCDP ESQWFKVIVS SRDIPGGDSI 540 LQLPSLGPWP STSLSS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00161 | RICIN | 0.003 | 403 | 509 | 121 | + Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. | ||
| pfam00150 | Cellulase | 8.0e-13 | 71 | 348 | 285 | + Cellulase (glycosyl hydrolase family 5). | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAD41089.2 | 0 | 31 | 555 | 30 | 550 | OSJNBb0011N17.6 [Oryza sativa (japonica cultivar-group)] |
| EMBL | CAH67676.1 | 0 | 31 | 555 | 33 | 553 | H0510A06.1 [Oryza sativa (indica cultivar-group)] |
| GenBank | EAY94563.1 | 0 | 31 | 555 | 30 | 552 | hypothetical protein OsI_16341 [Oryza sativa Indica Group] |
| RefSeq | NP_001132121.1 | 0 | 32 | 556 | 31 | 555 | hypothetical protein LOC100193538 [Zea mays] |
| RefSeq | XP_002446674.1 | 0 | 31 | 556 | 31 | 556 | hypothetical protein SORBIDRAFT_06g020260 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 0.0000002 | 32 | 362 | 8 | 335 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.0000002 | 32 | 362 | 8 | 335 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 0.000003 | 32 | 362 | 8 | 335 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.000003 | 32 | 362 | 8 | 335 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 4dm1_C | 0.001 | 45 | 206 | 28 | 168 | A Chain A, Contribution Of Disulfide Bond Toward Thermostability In Hyperthermostable Endocellulase |
