| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb06g021440.1 |
| Family | GH9 |
| Protein Properties | Length: 631 Molecular Weight: 69551.5 Isoelectric Point: 8.6998 |
| Chromosome | Chromosome/Scaffold: 6 Start: 50717335 End: 50719929 |
| Description | Six-hairpin glycosidases superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 111 | 590 | 0 |
| QYAEALHKALLFFNAQKSGRIPKNNGIPWRGNSGLKDGSDAKDVKGGLVGGYYDAGDNIKFHFPMAFSMTLLSWSVIEYSAKYKAVEEYDHVRELIKWGT DYLLHTFNSSASTIDHVYAQVGAAKTGKIKSRTPDDHYCWNRPEDMAYPRPSLPVTSAPDLGGEIAAALAAASIAFRDDAAYSKKLVHGAVTMFGFATGD GWANEHATYSRHQQDIEPFYNSTSYWDEYVWGAAWVYYATGNTTYLSFAADPQLAERAKAFDDVLDLSVFSWDNKLPGAGLLLSRLRMFLNPGYPYEQSL VGYHKESRLDMCKYFRRFGAFNFTRGGLALFNHGRGQPLQYVVANSFLAALFADYMEAINVPGWYCGPNFMPTQDLRAFAKSQLNYILGDNPRKMSYVVG FGNKYPRHVHHRGASTPHSRVKYSCTGGYKWRDSKKADPNVITGAMVGGPDRNDRFNDSRMAFGQTEPTLVGNAGLVAAL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 631 Download |
| MYSANHWGGS FDITTDGASE EDDSRNTDVD GGALSARQHH ELDETQQGWL LGPPEAKKKG 60 RHVDLGCVLV KRKVLWWAFW GLVAGFVLVG LPIIVYKSIP RRAPPPPPPD QYAEALHKAL 120 LFFNAQKSGR IPKNNGIPWR GNSGLKDGSD AKDVKGGLVG GYYDAGDNIK FHFPMAFSMT 180 LLSWSVIEYS AKYKAVEEYD HVRELIKWGT DYLLHTFNSS ASTIDHVYAQ VGAAKTGKIK 240 SRTPDDHYCW NRPEDMAYPR PSLPVTSAPD LGGEIAAALA AASIAFRDDA AYSKKLVHGA 300 VTMFGFATGD GWANEHATYS RHQQDIEPFY NSTSYWDEYV WGAAWVYYAT GNTTYLSFAA 360 DPQLAERAKA FDDVLDLSVF SWDNKLPGAG LLLSRLRMFL NPGYPYEQSL VGYHKESRLD 420 MCKYFRRFGA FNFTRGGLAL FNHGRGQPLQ YVVANSFLAA LFADYMEAIN VPGWYCGPNF 480 MPTQDLRAFA KSQLNYILGD NPRKMSYVVG FGNKYPRHVH HRGASTPHSR VKYSCTGGYK 540 WRDSKKADPN VITGAMVGGP DRNDRFNDSR MAFGQTEPTL VGNAGLVAAL VAVTSSGRGV 600 GVGAVDKNSM FSAVPPLFPA TPPPPPAWKP * 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00119 | PLN00119 | 4.0e-100 | 112 | 578 | 482 | + endoglucanase | ||
| PLN02613 | PLN02613 | 7.0e-102 | 110 | 579 | 484 | + endoglucanase | ||
| PLN02266 | PLN02266 | 2.0e-104 | 112 | 578 | 478 | + endoglucanase | ||
| PLN02345 | PLN02345 | 1.0e-128 | 115 | 579 | 475 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 4.0e-130 | 112 | 579 | 475 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG29946.1 | 0 | 1 | 630 | 1 | 623 | glycoside transferase, six-hairpin, subgroup [Zea mays] |
| GenBank | EAY94707.1 | 0 | 1 | 630 | 1 | 641 | hypothetical protein OsI_16485 [Oryza sativa Indica Group] |
| RefSeq | NP_001053204.1 | 0 | 1 | 630 | 1 | 623 | Os04g0497200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147970.1 | 0 | 1 | 630 | 1 | 623 | glycoside transferase, six-hairpin, subgroup [Zea mays] |
| RefSeq | XP_002446733.1 | 0 | 1 | 614 | 1 | 614 | hypothetical protein SORBIDRAFT_06g021440 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 112 | 597 | 5 | 432 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3) |
| PDB | 1ksc_A | 0 | 112 | 597 | 5 | 432 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3) |
| PDB | 1ks8_A | 0 | 112 | 597 | 5 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 108 | 600 | 2 | 447 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 108 | 600 | 2 | 447 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
