| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb06g022385.1 |
| Family | GH1 |
| Protein Properties | Length: 379 Molecular Weight: 43561.6 Isoelectric Point: 6.7355 |
| Chromosome | Chromosome/Scaffold: 6 Start: 51604620 End: 51606386 |
| Description | beta glucosidase 46 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 1 | 360 | 0 |
| AGIQPFVTINHYDIPQELQERYGSWLSPEIQEDFIYFAELCFKMFGDRVKHWVTFNEPNLMVKLAYFAGGFPPSHCSEPYGKCDSGNSSTEPYIAAHNMI LAHAKAVNIYRKNYKAKQGGSIGITLHMRWYEPLRNITEDHLAVSRALSFEAQWFLDPLFFGEYPQQMHKILGPNLPKFTEGEKQLLKKQIDFIGVNHYE TYYVKDCIYSQCDLDLYTCVALVSESSERNGMPIGKLTPANSYVVPSSMEKLVMYLEQRYKSIPLYITENGYAQIGNSSTTTEELINDNGRSGYIGDYLT YLSFAIRKGADVRGYFVWSLMDTFEWNSGYTAKYGLFHVDFKSLKRTPRLSAKWYSKFIK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 379 Download |
| AGIQPFVTIN HYDIPQELQE RYGSWLSPEI QEDFIYFAEL CFKMFGDRVK HWVTFNEPNL 60 MVKLAYFAGG FPPSHCSEPY GKCDSGNSST EPYIAAHNMI LAHAKAVNIY RKNYKAKQGG 120 SIGITLHMRW YEPLRNITED HLAVSRALSF EAQWFLDPLF FGEYPQQMHK ILGPNLPKFT 180 EGEKQLLKKQ IDFIGVNHYE TYYVKDCIYS QCDLDLYTCV ALVSESSERN GMPIGKLTPA 240 NSYVVPSSME KLVMYLEQRY KSIPLYITEN GYAQIGNSST TTEELINDNG RSGYIGDYLT 300 YLSFAIRKGA DVRGYFVWSL MDTFEWNSGY TAKYGLFHVD FKSLKRTPRL SAKWYSKFIK 360 GYEQIEMVSE ESPKHMVS* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02814 | PLN02814 | 8.0e-94 | 2 | 361 | 372 | + beta-glucosidase | ||
| PLN02998 | PLN02998 | 4.0e-94 | 2 | 361 | 369 | + beta-glucosidase | ||
| PLN02849 | PLN02849 | 2.0e-94 | 2 | 361 | 365 | + beta-glucosidase | ||
| TIGR03356 | BGL | 5.0e-97 | 1 | 355 | 355 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 4.0e-110 | 1 | 361 | 367 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001053302.1 | 0 | 2 | 375 | 136 | 511 | Os04g0513100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002448166.1 | 0 | 1 | 378 | 1 | 378 | hypothetical protein SORBIDRAFT_06g022385 [Sorghum bicolor] |
| RefSeq | XP_002448169.1 | 0 | 2 | 378 | 133 | 510 | hypothetical protein SORBIDRAFT_06g022410 [Sorghum bicolor] |
| RefSeq | XP_002448170.1 | 0 | 2 | 378 | 440 | 817 | hypothetical protein SORBIDRAFT_06g022420 [Sorghum bicolor] |
| RefSeq | XP_002448173.1 | 0 | 2 | 361 | 136 | 498 | hypothetical protein SORBIDRAFT_06g022450 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gnr_A | 0 | 2 | 360 | 123 | 487 | A Chain A, Crystal Structure Of Drosophila Peptidoglycan Recognition Protein Sd (Pgrp-Sd) |
| PDB | 3gnp_A | 0 | 2 | 360 | 123 | 487 | A Chain A, Crystal Structure Of Drosophila Peptidoglycan Recognition Protein Sd (Pgrp-Sd) |
| PDB | 3gno_A | 0 | 2 | 360 | 123 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2rgm_B | 0 | 2 | 360 | 126 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2rgm_A | 0 | 2 | 360 | 126 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CN143487 | 257 | 63 | 318 | 0 |
| AW671741 | 215 | 4 | 218 | 0 |
| HO320743 | 176 | 155 | 329 | 0 |
| HO320743 | 86 | 63 | 148 | 0 |
| HO320744 | 209 | 172 | 379 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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