| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb06g025300.1 |
| Family | AA1 |
| Protein Properties | Length: 579 Molecular Weight: 63063.9 Isoelectric Point: 7.0472 |
| Chromosome | Chromosome/Scaffold: 6 Start: 54233832 End: 54238295 |
| Description | SKU5 similar 5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 42 | 400 | 0 |
| SQQAILINGEFPGPKIECQTNENLIINVRNNLSDPFLLSWSGLQQRKNSWQDGVSGTNCPIPPGQNFTYRMQAKDQIGSFYYFPSLAFHKAAGGFGAIRI YSRPRIPIPFPPPADEYTVLIGDWYATNHKSLQDMLDSGKELPPPDGILINGKGSTDAAHFAVEQGKTYRLRISNVGLQNTLNIRIQEHNMTLVEVEGTH TVQNTYSSLDVHVGQSLSVLFTADRPAKDYHVVVSARFTNATLLSTAVVRYAGSSGLASGPLPAGPTDDVDFSLNQARSIRTNLTASGPRPNPQGSYHYG SINVTRTIRLASSAVLVGGKRRYAVNGVSFAEADTPLKLADYYNISGVFRLGGIPDAPA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 579 Download |
| MRFVLFFVCI CFLSFSAARA EGPYQFLDWE ITYGNISRLG VSQQAILING EFPGPKIECQ 60 TNENLIINVR NNLSDPFLLS WSGLQQRKNS WQDGVSGTNC PIPPGQNFTY RMQAKDQIGS 120 FYYFPSLAFH KAAGGFGAIR IYSRPRIPIP FPPPADEYTV LIGDWYATNH KSLQDMLDSG 180 KELPPPDGIL INGKGSTDAA HFAVEQGKTY RLRISNVGLQ NTLNIRIQEH NMTLVEVEGT 240 HTVQNTYSSL DVHVGQSLSV LFTADRPAKD YHVVVSARFT NATLLSTAVV RYAGSSGLAS 300 GPLPAGPTDD VDFSLNQARS IRTNLTASGP RPNPQGSYHY GSINVTRTIR LASSAVLVGG 360 KRRYAVNGVS FAEADTPLKL ADYYNISGVF RLGGIPDAPA AAATTGTAGG AATDDAPPPA 420 ATGTGDGAAE EVRNETAVMD SDHRSFVEVV LENGEDSVQS WHLDGYSVFV VGMDVGTWSN 480 KSRDGYNLVD AVSRCTVQVY PRGWTAVLIA LDNVGMWNMR SEVWARRYLG QQFYLRVYTP 540 SRSFRDELPM PDNALLCGRA TAAAATNSSR RLPLPRLY* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02991 | PLN02991 | 0 | 12 | 559 | 548 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 1 | 578 | 585 | + copper ion binding / oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 1 | 559 | 560 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 16 | 559 | 545 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 3 | 559 | 568 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAH67167.1 | 0 | 8 | 564 | 13 | 545 | H0211B05.4 [Oryza sativa (indica cultivar-group)] |
| GenBank | EEC77800.1 | 0 | 8 | 564 | 7 | 559 | hypothetical protein OsI_16980 [Oryza sativa Indica Group] |
| GenBank | EEE61490.1 | 0 | 8 | 564 | 7 | 559 | hypothetical protein OsJ_15776 [Oryza sativa Japonica Group] |
| RefSeq | NP_001053555.1 | 0 | 8 | 564 | 13 | 545 | Os04g0561900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002448327.1 | 0 | 1 | 578 | 1 | 578 | hypothetical protein SORBIDRAFT_06g025300 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 4.2039e-45 | 29 | 570 | 8 | 550 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis D172aE217A MUTANT COMPLEXED WITH LACTO-N- Fucopentaose Ii |
| PDB | 1asq_A | 4.2039e-45 | 29 | 570 | 8 | 550 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis D172aE217A MUTANT COMPLEXED WITH LACTO-N- Fucopentaose Ii |
| PDB | 1asp_B | 4.2039e-45 | 29 | 570 | 8 | 550 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis D172aE217A MUTANT COMPLEXED WITH LACTO-N- Fucopentaose Ii |
| PDB | 1asp_A | 4.2039e-45 | 29 | 570 | 8 | 550 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis D172aE217A MUTANT COMPLEXED WITH LACTO-N- Fucopentaose Ii |
| PDB | 1aso_B | 4.2039e-45 | 29 | 570 | 8 | 550 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis D172aE217A MUTANT COMPLEXED WITH LACTO-N- Fucopentaose Ii |
