| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb06g026010.1 |
| Family | GT47 |
| Protein Properties | Length: 569 Molecular Weight: 62702.8 Isoelectric Point: 8.537 |
| Chromosome | Chromosome/Scaffold: 6 Start: 55094589 End: 55096462 |
| Description | glycosyltransferase 18 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 80 | 433 | 0 |
| CDDGLIYVYDLPSEFNHDLVDDCESLWPWYSFCPYLANGGFGEAAATLPVFFNVTRNVSLPSWYNTDQFQLEVIIHRRLLSHRCRTTDPSLATAFYVPFY VGLDVGSHLWGDNSTAADRDRAGLRLLRWLNNQTSFQRSGGWDHFITLGRITWDFRRFGDDGWGTNFVVLPGIANVTRLGIEADRLDPMEVAVPYPTGFH PRTAADVRAWQRHVLSLRRSKLFGFAGAPRSGFRDDFREVLLEECEDAGSEHCRSVDCRGTRCTDNGAAVLELFLDSSFCLQPRGDSFTRRSLFDCMVAG AVPVLFWRRTAYDQYRWYLPPGPARGEAEDDGEWSVFIDRQALRVGNVSVRDIL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 569 Download |
| MPESPASPGK PPSQPGSPLN AATPFPASAL LRGSVLLLAF LVLQLVLFWN ILGFPSSRFL 60 PAPGHRNTTW PNGAVNGGAC DDGLIYVYDL PSEFNHDLVD DCESLWPWYS FCPYLANGGF 120 GEAAATLPVF FNVTRNVSLP SWYNTDQFQL EVIIHRRLLS HRCRTTDPSL ATAFYVPFYV 180 GLDVGSHLWG DNSTAADRDR AGLRLLRWLN NQTSFQRSGG WDHFITLGRI TWDFRRFGDD 240 GWGTNFVVLP GIANVTRLGI EADRLDPMEV AVPYPTGFHP RTAADVRAWQ RHVLSLRRSK 300 LFGFAGAPRS GFRDDFREVL LEECEDAGSE HCRSVDCRGT RCTDNGAAVL ELFLDSSFCL 360 QPRGDSFTRR SLFDCMVAGA VPVLFWRRTA YDQYRWYLPP GPARGEAEDD GEWSVFIDRQ 420 ALRVGNVSVR DILEGLSERR VRRMRERVVE MIPRLVYASS PDGLGDGMED ALDVALRGVL 480 ERFRRRRAST APQGFSAKRP PGRSVALARR VDNKSTPAPA PPSDGKNGSA AAVNQNASGT 540 KPSSPASSYV KPVVSKASAS TGKSLQKS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 4.0e-47 | 79 | 418 | 350 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY95237.1 | 0 | 80 | 489 | 64 | 467 | hypothetical protein OsI_17054 [Oryza sativa Indica Group] |
| GenBank | EAZ00823.1 | 0 | 16 | 493 | 15 | 487 | hypothetical protein OsI_22853 [Oryza sativa Indica Group] |
| GenBank | EAZ36900.1 | 0 | 16 | 493 | 15 | 487 | hypothetical protein OsJ_21244 [Oryza sativa Japonica Group] |
| RefSeq | NP_001057569.1 | 0 | 16 | 568 | 15 | 556 | Os06g0342000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002448367.1 | 0 | 1 | 568 | 1 | 568 | hypothetical protein SORBIDRAFT_06g026010 [Sorghum bicolor] |
