CAZyme Information

Basic Information
SpeciesSorghum bicolor
Cazyme IDSb06g026860.1
FamilyGT4
Protein PropertiesLength: 419 Molecular Weight: 46364.7 Isoelectric Point: 7.0925
ChromosomeChromosome/Scaffold: 6 Start: 55870177 End: 55873152
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT42233847.6e-39
  FLSINRFERKKNLDLAISAFALLRSVASTLPGDALQEATLTVAGGYDKRLKENVEYLEELKRLAVTEGVSGQVNFVTSCSTSERNELLSNCLCVLYTPKD
  EHFGIVPLEAMAAYKPVIACNSGGPVETVVNEVTGFLCDPSPTEFSKAMLKLVNDHDLAVRL
Full Sequence
Protein Sequence     Length: 419     Download
MAAAGGEVAG ASSGTRTKRL KIAVIHPDLG IGGAERLIVD AACQLAAHGH DVHVFTSHHD    60
KNRCFEETVS GLFPVTVYGD FLPRHVFYRF HAVCAYLRCI FVALCVLLRW PFFDVILVDQ    120
VSVVIPLLKL RASSKIIFYC HFPDLLLAQH TTMLRKLYRK PIDMIEEITT GMADLILVNS    180
KFTAATFART FSCLHARGIE PGVLYPAVSV EQFHEPHAYK LNFLSINRFE RKKNLDLAIS    240
AFALLRSVAS TLPGDALQEA TLTVAGGYDK RLKENVEYLE ELKRLAVTEG VSGQVNFVTS    300
CSTSERNELL SNCLCVLYTP KDEHFGIVPL EAMAAYKPVI ACNSGGPVET VVNEVTGFLC    360
DPSPTEFSKA MLKLVNDHDL AVRLGEQARD HVVQKFSTKT FGDLLNGYVL NVYHERME*     420
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd03798GT1_wlbH_like1.0e-3322397398+
cd03811GT1_WabH_like2.0e-3421397391+
COG0438RfaG2.0e-3618418405+
cd03801GT1_YqgM_like2.0e-4721397392+
cd03805GT1_ALG2_like020403397+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankEAY95346.101341813418hypothetical protein OsI_17177 [Oryza sativa Indica Group]
RefSeqNP_001053699.101341813418Os04g0589600 [Oryza sativa (japonica cultivar-group)]
RefSeqXP_002317454.10184123407predicted protein [Populus trichocarpa]
RefSeqXP_002447012.1014181418hypothetical protein SORBIDRAFT_06g026860 [Sorghum bicolor]
RefSeqXP_002525620.10164125402alpha-1,3-mannosyltransferase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2f9f_A6e-1822337926164A Chain A, Crystal Structure Of The Putative Mannosyl Transferase (Wbaz-1)from Archaeoglobus Fulgidus, Northeast Structural Genomics Target Gr29a
PDB2jjm_L0.0000002308399280372A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_K0.0000002308399280372A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_J0.0000002308399280372A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_I0.0000002308399280372A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
Metabolic Pathways
Pathway NameReactionECProtein Name
dolichyl-diphosphooligosaccharide biosynthesisRXN-5462EC-2.4.1.132GDP-Man:Man1GlcNAc2-PP-Dol α-1,3-mannosyltransferase
dolichyl-diphosphooligosaccharide biosynthesisRXN-5463EC-2.4.1.257GDP-Man:Man2GlcNAc2-PP-Dol α-1,6-mannosyltransferase
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GO874725340153510
CN129110268152820
GO851037295153090
CN149614242152560
GO848903316153300
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_021_00182.1Aquca_021_00182.2Aquca_021_00182.3
Arabidopsis lyrata477043
Arabidopsis thalianaAT1G78800.1
Brachypodium distachyonBradi5g19840.1
Brassica rapaBra035064
Carica papayaevm.model.supercontig_77.17
Capsella rubellaCarubv10022022m
Chlamydomonas reinhardtiig1920.t1
Citrus clementinaCiclev10022599mCiclev10020399m
Citrus sinensisorange1.1g036860m
Cucumis sativusCucsa.220170.2Cucsa.273740.2Cucsa.273740.1Cucsa.220170.1
Eucalyptus grandisEucgr.F01245.1
Fragaria vescamrna27271.1-v1.0-hybrid
Glycine maxGlyma12g35950.2Glyma12g35950.1Glyma13g34430.1Glyma13g34430.2
Gossypium raimondiiGorai.002G054000.2Gorai.002G054000.1
Linum usitatissimumLus10037008Lus10015797
Malus domesticaMDP0000319369MDP0000185482
Manihot esculentacassava4.1_008785m
Medicago truncatulaMedtr1g104880.1
Mimulus guttatusmgv1a007424m
Oryza sativaLOC_Os04g49960.1
Panicum virgatumPavirv00018845mPavirv00056995mPavirv00050038mPavirv00004378m
Physcomitrella patensPp1s246_77V6.1
Phaseolus vulgarisPhvul.005G081600.1
Picea abiesMA_499839g0010
Populus trichocarpaPotri.011G109000.1
Prunus persicappa006490mppa006502m
Ricinus communis29681.m001322
Setaria italicaSi017356mSi013830mSi010219m
Selaginella moellendorffii419620
Thellungiella halophilaThhalv10019736mThhalv10007837m
Vitis viniferaGSVIVT01014186001
Volvox carteriVocar20014584m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny