| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb06g027810.1 |
| Family | GH47 |
| Protein Properties | Length: 565 Molecular Weight: 64175.3 Isoelectric Point: 5.7141 |
| Chromosome | Chromosome/Scaffold: 6 Start: 56647768 End: 56653407 |
| Description | alpha-mannosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH47 | 109 | 540 | 0 |
| AMLHAWNSYVKYAWGMDELQPQSKNGINSFGGLGATLVDSLDTLYIMGLKDEFEKARDWVAESLDFDKDYDASVFETTIRVVGGLLSAYDLSGDKVFLEK AKDITDRLLPAWDTTSGIPYNRINLAHGRAHNPGWTNGDSILADSGTEQLEFIALSQRTGDPKYQQKAENVITQLQKIYPSDGLLPIYINPHSGTASYST ITFGAMGDSFYEYLLKVWVQGNKTEHVKHYRQMWETSMEGLLSLTKKTTPSNYYYICEKNGGSLSDKMDELACFAPGMLALGASGYGPEKSEQIMNLAKE LARTCYNFYQTTPTKLAGENYFFHTGQDMSVGTSWNILRPETVESLMYLWRLTGNKTYQDWGWDIFQAFEKNSRIESGYVGLRDVNTGEKDNMMQSFFLA ETLKYLYLLFSPPSVISFDEWVFNTEAHPLRI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 565 Download |
| MARRSSSSSS GAWRYLNPAY YLKRPKRLAL LFFVFVAATF AFWDRQSLVS EYESEISRLE 60 DDINRLHDQL RKAGVHLDEN PVVSNRNSRK DLVEIDPVNN ERREKVKEAM LHAWNSYVKY 120 AWGMDELQPQ SKNGINSFGG LGATLVDSLD TLYIMGLKDE FEKARDWVAE SLDFDKDYDA 180 SVFETTIRVV GGLLSAYDLS GDKVFLEKAK DITDRLLPAW DTTSGIPYNR INLAHGRAHN 240 PGWTNGDSIL ADSGTEQLEF IALSQRTGDP KYQQKAENVI TQLQKIYPSD GLLPIYINPH 300 SGTASYSTIT FGAMGDSFYE YLLKVWVQGN KTEHVKHYRQ MWETSMEGLL SLTKKTTPSN 360 YYYICEKNGG SLSDKMDELA CFAPGMLALG ASGYGPEKSE QIMNLAKELA RTCYNFYQTT 420 PTKLAGENYF FHTGQDMSVG TSWNILRPET VESLMYLWRL TGNKTYQDWG WDIFQAFEKN 480 SRIESGYVGL RDVNTGEKDN MMQSFFLAET LKYLYLLFSP PSVISFDEWV FNTEAHPLRI 540 VPVNDNKGIG TPVRPFGRKQ GKPE* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01532 | Glyco_hydro_47 | 0 | 109 | 540 | 451 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| PTZ00470 | PTZ00470 | 0 | 99 | 544 | 457 | + glycoside hydrolase family 47 protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN34773.1 | 0 | 1 | 564 | 1 | 565 | unknown [Zea mays] |
| EMBL | CAH66776.1 | 0 | 1 | 564 | 1 | 572 | OSIGBa0113I13.2 [Oryza sativa (indica cultivar-group)] |
| EMBL | CBI18472.1 | 0 | 1 | 564 | 1 | 569 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001053800.1 | 0 | 1 | 564 | 1 | 572 | Os04g0606400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002448484.1 | 0 | 1 | 564 | 1 | 564 | hypothetical protein SORBIDRAFT_06g027810 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nxc_A | 0 | 96 | 541 | 14 | 466 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 1fmi_A | 0 | 97 | 540 | 4 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo3_A | 0 | 97 | 540 | 4 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo2_A | 0 | 97 | 540 | 4 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1x9d_A | 0 | 97 | 540 | 82 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
