| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb06g029980.1 |
| Family | GT8 |
| Protein Properties | Length: 556 Molecular Weight: 63400.8 Isoelectric Point: 8.9468 |
| Chromosome | Chromosome/Scaffold: 6 Start: 58439493 End: 58441903 |
| Description | galacturonosyltransferase 10 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 215 | 528 | 0 |
| CLGVRLTMEWFKSPELQRKFSDRSPSVQSNLRDNSLYHFCVFSDNILAVSVVVNSTAINSRHPDKVVFHLVTDDLNYAPMKAWFAMNDYRGVTVDIQKVE DFTWLNASYVPVLKQLQNAATQKFYFSGSGNRGTPIKFRNPKYLSMLNHLRFYIPEIYPELQKVVFLDDDIVVQKDLSELFTINLNGNVMGAVETCMETF HRFHKYLNHSHPLIRAHFDPDACGWAFGMNVLDLVEWRNKNVTGIYHYWQERNSDHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGYTTVDPATIKEG AVLHYNGNMKPWLK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 556 Download |
| MRRRPFLDQR RPSFKRRWQQ RPWWVRLALS LLLALACVLL LAVLLGSPDP GASPSTSAAS 60 SGSETTSAPL LRQRSYLEGI TDALNMTDEM LSARSFSRQL MDQIYLAKTY VIVAKEANNL 120 QFVAELSAQV RRAQSILAHA AAHGGTVMEQ EAEKAIRDMS VLLFQAQQLR YDSGITIMKL 180 KGQIQSLEEK SKAEADKSTK YGQIAAEELP KGLYCLGVRL TMEWFKSPEL QRKFSDRSPS 240 VQSNLRDNSL YHFCVFSDNI LAVSVVVNST AINSRHPDKV VFHLVTDDLN YAPMKAWFAM 300 NDYRGVTVDI QKVEDFTWLN ASYVPVLKQL QNAATQKFYF SGSGNRGTPI KFRNPKYLSM 360 LNHLRFYIPE IYPELQKVVF LDDDIVVQKD LSELFTINLN GNVMGAVETC METFHRFHKY 420 LNHSHPLIRA HFDPDACGWA FGMNVLDLVE WRNKNVTGIY HYWQERNSDH TLWKLGSLPP 480 GLLAFYGLVE ALDPKWHVLG LGYTTVDPAT IKEGAVLHYN GNMKPWLKIG MEKYKSFWDS 540 YVDYSHPLIQ QCFMR* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02718 | PLN02718 | 1.0e-132 | 98 | 552 | 459 | + Probable galacturonosyltransferase | ||
| PLN02910 | PLN02910 | 3.0e-163 | 99 | 552 | 468 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02523 | PLN02523 | 8.0e-164 | 73 | 552 | 504 | + galacturonosyltransferase | ||
| PLN02742 | PLN02742 | 0 | 2 | 555 | 558 | + Probable galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 0 | 90 | 552 | 465 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN27553.1 | 0 | 1 | 555 | 1 | 555 | unknown [Zea mays] |
| GenBank | EEC78094.1 | 0 | 1 | 553 | 1 | 554 | hypothetical protein OsI_17583 [Oryza sativa Indica Group] |
| RefSeq | NP_001054014.1 | 0 | 1 | 553 | 1 | 554 | Os04g0636100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001140891.1 | 0 | 1 | 555 | 1 | 555 | hypothetical protein LOC100272968 [Zea mays] |
| RefSeq | XP_002447180.1 | 0 | 1 | 555 | 1 | 555 | hypothetical protein SORBIDRAFT_06g029980 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ss9_A | 0.00005 | 257 | 526 | 7 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1ga8_A | 0.001 | 354 | 526 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1g9r_A | 0.001 | 354 | 526 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
