| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb06g030310.1 |
| Family | CE8 |
| Protein Properties | Length: 740 Molecular Weight: 79725.2 Isoelectric Point: 5.1869 |
| Chromosome | Chromosome/Scaffold: 6 Start: 58764739 End: 58767217 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 429 | 722 | 0 |
| VVAQDGSGDFKTISEAIAAVPKTFEGRFVIYVKSGVYKEYVTVPKNMANIFMYGDGPTKTVVTGDKSNTGGFATIATPTFSAEGNGFICKSMGFVNTAGP DGHQAVAMHVQGDMSVFFNCRFEGYQDTLYVHANRQFFRNCEVLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPE QALFPVRLQVPSYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVNWPGYRVIGQAEATHFTAGVFIDG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 740 Download |
| MANRVAVASV IAAVGIVAVI GTIAAVTSAK KVDDNDAGGL FSSVKLSTVC ASTLYPQKCE 60 QSLKPVVNDT SDPEDVLRAA FNVALDEVAA AFQRSAHIGK GATDNLTKNA MEVCKKLLDD 120 ATEDLGAMSR LKPQDVVRHV KDLRVWVSGV MTYVYTCADG FEKPELKEAM DKVLQNSTEL 180 SSNALAILTR LGELLPEEAK ALNATLAGAG HGRRLLGWQM GEAEEVTSGG RGLLAVDDKL 240 GEIADVASAN RKLLSDTLDE IAGMSHGANG RRLLSTLWSQ ITSTQGEDVL AHQQKLGVSP 300 DDETDHAARR NLLSTELDSI ASTSAEANRQ LLAAEELPDE LAGKRQLLSR TLMGIDEAAT 360 EAKRQLDEAT TENTMSETEH RVLTTDLVGT FDEIQDGRSG APPGNFPKWM SATQRRLLQL 420 PSLQKPNKVV AQDGSGDFKT ISEAIAAVPK TFEGRFVIYV KSGVYKEYVT VPKNMANIFM 480 YGDGPTKTVV TGDKSNTGGF ATIATPTFSA EGNGFICKSM GFVNTAGPDG HQAVAMHVQG 540 DMSVFFNCRF EGYQDTLYVH ANRQFFRNCE VLGTVDFIFG NSAALFQNCL MTVRKPGDSQ 600 SNMVTAQGRT DPNMPTGIVL QGCRIVPEQA LFPVRLQVPS YLGRPWKEYA RTVVMESTIG 660 DLIRPEGWAE WMGDLGLKTL YYAEYANTGP GAGTSKRVNW PGYRVIGQAE ATHFTAGVFI 720 DGMTWLQSTG TPNVMGFTK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02745 | PLN02745 | 5.0e-23 | 46 | 195 | 156 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 6.0e-141 | 404 | 730 | 329 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 3.0e-164 | 407 | 736 | 332 | + Putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 427 | 723 | 298 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAC09455.2 | 0 | 235 | 739 | 213 | 717 | H0423H10.1 [Oryza sativa (indica cultivar-group)] |
| EMBL | CAH68135.1 | 0 | 38 | 397 | 35 | 395 | B0414F07.5 [Oryza sativa (indica cultivar-group)] |
| EMBL | CAH68135.1 | 0 | 235 | 739 | 467 | 971 | B0414F07.5 [Oryza sativa (indica cultivar-group)] |
| RefSeq | NP_001145377.1 | 0 | 33 | 739 | 30 | 727 | hypothetical protein LOC100278720 [Zea mays] |
| RefSeq | XP_002447200.1 | 0 | 30 | 739 | 30 | 739 | hypothetical protein SORBIDRAFT_06g030310 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 427 | 737 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 426 | 737 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1qjv_B | 2e-27 | 427 | 715 | 5 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 2e-27 | 427 | 715 | 5 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 3e-27 | 427 | 715 | 5 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
