| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb06g030810.1 |
| Family | GT43 |
| Protein Properties | Length: 455 Molecular Weight: 48853.8 Isoelectric Point: 6.7359 |
| Chromosome | Chromosome/Scaffold: 6 Start: 59259834 End: 59263355 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT43 | 199 | 407 | 0 |
| LAHTLRLVDAQLVWIVVEPGHRTDAVAAVLSRSNLDFLHITGAGDSTASLRLHALREIRTKRMDGIVVFADENSILRTELFDEAQKVTTVGAVPVGILGE DDGTSESFLQAPSCDAEGNLVGYRISEETVLPANRSDMLMSSRLEWAGFVVNARALWEDTKERPVWVRDLSAIDDADARAASPLALVTDAGRVEPLASCA QAALAWSLR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 455 Download |
| MKLPLLRPLW PGLGPAAGPA DAAPEPAKPS LPATWLLLHA LFCATSMAVG FRFSRLIVYL 60 LFLPTPPINP AAHLVSLVSP PAVVLAGANA TAMATITTTT TTTTTVTTTT TVAAEIGDHP 120 QPQHHHHHHG PVFVGRHPIR VRAWPHPDPS ELLKAHRILA AVQNAQRSTK RRGAGPARPV 180 IAVTPTTTSA LQVPSLTSLA HTLRLVDAQL VWIVVEPGHR TDAVAAVLSR SNLDFLHITG 240 AGDSTASLRL HALREIRTKR MDGIVVFADE NSILRTELFD EAQKVTTVGA VPVGILGEDD 300 GTSESFLQAP SCDAEGNLVG YRISEETVLP ANRSDMLMSS RLEWAGFVVN ARALWEDTKE 360 RPVWVRDLSA IDDADARAAS PLALVTDAGR VEPLASCAQA ALAWSLRSDS LHEVKFPHEW 420 KIDPPLLNTG ARQQTVEPET QPMQTTLAST EDQH* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02458 | PLN02458 | 1.0e-12 | 176 | 356 | 191 | + transferase, transferring glycosyl groups | ||
| pfam03360 | Glyco_transf_43 | 2.0e-23 | 199 | 410 | 230 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 1.0e-51 | 178 | 409 | 244 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAI93182.1 | 0 | 1 | 454 | 1 | 453 | glycosyltransferase [Sorghum bicolor] |
| GenBank | EEC78139.1 | 0 | 1 | 454 | 1 | 446 | hypothetical protein OsI_17696 [Oryza sativa Indica Group] |
| RefSeq | NP_001105810.1 | 0 | 1 | 419 | 1 | 416 | glycosyltransferase [Zea mays] |
| RefSeq | NP_001148104.1 | 0 | 1 | 454 | 1 | 454 | LOC100281712 [Zea mays] |
| RefSeq | XP_002448650.1 | 0 | 1 | 454 | 1 | 454 | hypothetical protein SORBIDRAFT_06g030810 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2d0j_D | 0.000000004 | 180 | 412 | 5 | 230 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 2d0j_C | 0.000000004 | 180 | 412 | 5 | 230 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 2d0j_B | 0.000000004 | 180 | 412 | 5 | 230 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 2d0j_A | 0.000000004 | 180 | 412 | 5 | 230 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 1v84_B | 0.00000004 | 183 | 410 | 8 | 235 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FL729162 | 264 | 164 | 427 | 0 |
| EE178691 | 232 | 130 | 361 | 0 |
| EC888451 | 230 | 130 | 359 | 0 |
| CO452360 | 229 | 130 | 358 | 0 |
| FL744805 | 250 | 206 | 455 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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