| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb06g032760.1 |
| Family | CBM49 |
| Protein Properties | Length: 631 Molecular Weight: 68254.6 Isoelectric Point: 6.2591 |
| Chromosome | Chromosome/Scaffold: 6 Start: 60858691 End: 60861164 |
| Description | glycosyl hydrolase 9C1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM49 | 534 | 615 | 1.6e-29 |
| LEFVHTVSNSWTTNGVEYYRHVVTAKNTCGHPITYLKLHVKGLSGPIYGVSAATAKEKDTYELPAWLTSLAAGEQLTIVYIQ | |||
| GH9 | 37 | 501 | 0 |
| DYAGAFDKCLQFFEAQRSGKLPADRRVHWRGDSALTDGFSQGVDLVGGYYDSGDHVKFGFPMAYAVTMLAWGVLEFEKEMVAANNHQRALDAIRWGTNYF VKAHTEPNVLWVQVGDGDSDHLCWERAEDMSTPRTAFKIDTNHPGSEVAAETAAALAAASKAFRPYDSMYADLLLVHAKQLFTFADTFRGRYDDSLLSAK KFYPSGSGYEDELLWAAAWLHEATGDEKYLQYVSRNAEDFGGIGMSMLEFSWDNKYAGLQVLLSKAVLAHGGGGGEYADTLRQYQAKAEFFLCACLQKNG GHNMKLTPGGLLHVDEWNNMQYVSSASFLLTVYADYLSASRGALRCPDGEVKPGEMVRFARSQADYVLGKNPRGMSYMVGYGSYFPTHVHHRGASIPSVH AMGSVVGCMDGFDRFFNSKGADPNVLQGAVVGGPDANDGFVDDRCNYQQAEPTLAGNAPICGVFA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 631 Download |
| MARLMTTATK TPATLAVAAS FLLLAAAAAS ASSAPFDYAG AFDKCLQFFE AQRSGKLPAD 60 RRVHWRGDSA LTDGFSQGVD LVGGYYDSGD HVKFGFPMAY AVTMLAWGVL EFEKEMVAAN 120 NHQRALDAIR WGTNYFVKAH TEPNVLWVQV GDGDSDHLCW ERAEDMSTPR TAFKIDTNHP 180 GSEVAAETAA ALAAASKAFR PYDSMYADLL LVHAKQLFTF ADTFRGRYDD SLLSAKKFYP 240 SGSGYEDELL WAAAWLHEAT GDEKYLQYVS RNAEDFGGIG MSMLEFSWDN KYAGLQVLLS 300 KAVLAHGGGG GEYADTLRQY QAKAEFFLCA CLQKNGGHNM KLTPGGLLHV DEWNNMQYVS 360 SASFLLTVYA DYLSASRGAL RCPDGEVKPG EMVRFARSQA DYVLGKNPRG MSYMVGYGSY 420 FPTHVHHRGA SIPSVHAMGS VVGCMDGFDR FFNSKGADPN VLQGAVVGGP DANDGFVDDR 480 CNYQQAEPTL AGNAPICGVF ARLASEPADA SDNNRPVPSY SPPHDSSPSK GSPLEFVHTV 540 SNSWTTNGVE YYRHVVTAKN TCGHPITYLK LHVKGLSGPI YGVSAATAKE KDTYELPAWL 600 TSLAAGEQLT IVYIQGGPAA KFSVVSYKTA * 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00759 | Glyco_hydro_9 | 1.0e-178 | 37 | 501 | 467 | + Glycosyl hydrolase family 9. | ||
| PLN02340 | PLN02340 | 0 | 35 | 628 | 596 | + endoglucanase | ||
| PLN02171 | PLN02171 | 0 | 37 | 630 | 607 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 36 | 513 | 479 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 37 | 504 | 468 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| Swiss-Prot | A2XYW8 | 0 | 33 | 630 | 34 | 625 | GUN13_ORYSI RecName: Full=Endoglucanase 13; AltName: Full=Endo-1,4-beta glucanase 13; AltName: Full=OsGLU6; Flags: Precursor |
| EMBL | CBG76271.1 | 0 | 33 | 630 | 29 | 620 | OO_Ba0005L10-OO_Ba0081K17.22 [Oryza officinalis] |
| GenBank | EAY96028.1 | 0 | 33 | 630 | 34 | 625 | hypothetical protein OsI_17901 [Oryza sativa Indica Group] |
| RefSeq | NP_001054243.1 | 0 | 33 | 630 | 34 | 625 | Os04g0674800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002448763.1 | 0 | 1 | 630 | 1 | 630 | hypothetical protein SORBIDRAFT_06g032760 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 36 | 505 | 3 | 430 | A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q) From Cichorium Intybus In Complex With 1-Kestose |
| PDB | 1ksc_A | 0 | 36 | 505 | 3 | 430 | A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q) From Cichorium Intybus In Complex With 1-Kestose |
| PDB | 1ks8_A | 0 | 36 | 505 | 3 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 36 | 506 | 4 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 36 | 506 | 4 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
