| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb07g001140.1 |
| Family | GH116 |
| Protein Properties | Length: 930 Molecular Weight: 101673 Isoelectric Point: 5.6827 |
| Chromosome | Chromosome/Scaffold: 7 Start: 1107165 End: 1112187 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH116 | 498 | 860 | 0 |
| GQFLYLEGMEYNMYNTYDVHFYASFALLSLFPSLELSLQRDFARAVLLHDPRRRRTFDGRTVPRKVLGTVPHDVGLNDPWVEMNEYMLHDPALWKDLNPK FVLQVYRDAVATGDAAFAEAAWPAVYIAMAYMHQFDRDGDGMVENEGIPDQTYDIWSVSGVSAYTGGLWVAALEAAAGMARVVGDRHAEAYFRGRRDRAA RVYDAELWNGTYFRYDNSGGGACSESIMADQMAGQWYARACGMEPVVEEGKARSALATVLDYNVMRVKGGAVGAVNGMRPDGAVDASSGQSKEVWPGVTY AVAAAMVHEGMHEAAFRTAKGAHDAGWGKDGFGYAFQTPEAWTEDGGYRSLHYMRPLGIWAMQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 930 Download |
| MGSEELQQAK VLSSIDCSQP PARTWQRRFD DEGKKVAMYS LTMNDLTAIV GVYDPLRKWM 60 DNCYRGVPLG GIGAGSIGRS YRGYFQQFQI FPATNEEKPI LANQFSAFVS RPNGTKYSTV 120 LSAPTADLLK EVDKASIGSW DWKLKEEKCT YHALFPRSWT VYDGEPDPEI KITSRQISPF 180 IPHNYRESSF PAAVFTFTVH NSGSTAADVT LLFTWANSVG GKSELTGNHV NSKMTEQDGV 240 HGVLLHHRTA GGHPPVTFAI ASQETDGVRV SVCPSFTMGP SGSRDFTAAD MWDEIKKHGA 300 FGHAGAGNAA RAASKAGSSL GAAVAASTTV PAGETRVVSF SLAWACPDIK FPAGSTYHRR 360 YTKFYGVDAD AAAEQLAHDA LLEHMNWESQ IEEWQRPILN DKRLPEWYPV ALFNELYYLN 420 AGGTIWTDGQ PPKKAGFASS LTGTEPFSID TLLAEDGGTG GSAVDGVVRA VASAKELSHS 480 AAAAFGAALL RDGEDNVGQF LYLEGMEYNM YNTYDVHFYA SFALLSLFPS LELSLQRDFA 540 RAVLLHDPRR RRTFDGRTVP RKVLGTVPHD VGLNDPWVEM NEYMLHDPAL WKDLNPKFVL 600 QVYRDAVATG DAAFAEAAWP AVYIAMAYMH QFDRDGDGMV ENEGIPDQTY DIWSVSGVSA 660 YTGGLWVAAL EAAAGMARVV GDRHAEAYFR GRRDRAARVY DAELWNGTYF RYDNSGGGAC 720 SESIMADQMA GQWYARACGM EPVVEEGKAR SALATVLDYN VMRVKGGAVG AVNGMRPDGA 780 VDASSGQSKE VWPGVTYAVA AAMVHEGMHE AAFRTAKGAH DAGWGKDGFG YAFQTPEAWT 840 EDGGYRSLHY MRPLGIWAMQ WALSPPELHK DLRAPGARSV EEESSPADAA LGQAQFEKVA 900 NMLRLPEEKQ PKGYLWAIYK VIRQMVLPE* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 1.0e-6 | 538 | 718 | 197 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 5.0e-28 | 61 | 428 | 376 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 2.0e-56 | 66 | 366 | 309 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 2.0e-71 | 495 | 863 | 388 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 2.0e-155 | 498 | 861 | 368 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAE99037.1 | 0 | 13 | 926 | 21 | 956 | hypothetical protein [Arabidopsis thaliana] |
| GenBank | EEE67921.1 | 0 | 1 | 928 | 1 | 918 | hypothetical protein OsJ_25789 [Oryza sativa Japonica Group] |
| RefSeq | NP_001060825.1 | 0 | 1 | 928 | 1 | 927 | Os08g0111200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002325943.1 | 0 | 52 | 927 | 23 | 890 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002444904.1 | 0 | 1 | 929 | 1 | 929 | hypothetical protein SORBIDRAFT_07g001140 [Sorghum bicolor] |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| EE024511 | 289 | 562 | 850 | 0 |
| DR806818 | 289 | 562 | 850 | 0 |
| EC904198 | 279 | 572 | 850 | 0 |
| FL855532 | 275 | 576 | 850 | 0 |
| EE171321 | 252 | 599 | 850 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
