| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb07g001480.1 |
| Family | GH9 |
| Protein Properties | Length: 503 Molecular Weight: 53473.4 Isoelectric Point: 8.2355 |
| Chromosome | Chromosome/Scaffold: 7 Start: 1592182 End: 1593866 |
| Description | cellulase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 31 | 494 | 0 |
| NYADALAKSIIYFEGQRSGKLPPGNRMPWRGDSGLTDGAQHNVDLVGGYYDAGDNMKFGLPMAFTTTMLAWSVADFGKYMGANLPHARAAVRWGADYLLK AATSTPGTLYVQVGDPAQDHKCWERPEDMDTPRAVYAVTSSNPGSDVAAETAAALAASAVAFRRADPGYAARLLGAAVVAFELADRHRGSYSQGTLSAAV CPFYCSYSGYDDELLWAAAWLHRASGNATFMAYVRANGVQDGAGNDDYSFSWDDKRIGTKVLLARGVLRRDRRRNVPGLQLYKAHSDSYVCSLVPGAAGF QAGQYTPGGLIYREGGSNMQYVTTTTFLLLAYAKYLRSAGGNVACGGGGEVAPAELVALAKRQVDYILGKNPAGTSFMVGFGERYPRRLHHRGASLPSVR AHPARIGCDQGFAYLHSAAPDANLLVGAVVGGPDARDGFVDDRDSYGQTEPATYINAPLVGVLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 503 Download |
| MEQPRSRLLS VCAVVLLLLL LLAPGLAAAF NYADALAKSI IYFEGQRSGK LPPGNRMPWR 60 GDSGLTDGAQ HNVDLVGGYY DAGDNMKFGL PMAFTTTMLA WSVADFGKYM GANLPHARAA 120 VRWGADYLLK AATSTPGTLY VQVGDPAQDH KCWERPEDMD TPRAVYAVTS SNPGSDVAAE 180 TAAALAASAV AFRRADPGYA ARLLGAAVVA FELADRHRGS YSQGTLSAAV CPFYCSYSGY 240 DDELLWAAAW LHRASGNATF MAYVRANGVQ DGAGNDDYSF SWDDKRIGTK VLLARGVLRR 300 DRRRNVPGLQ LYKAHSDSYV CSLVPGAAGF QAGQYTPGGL IYREGGSNMQ YVTTTTFLLL 360 AYAKYLRSAG GNVACGGGGE VAPAELVALA KRQVDYILGK NPAGTSFMVG FGERYPRRLH 420 HRGASLPSVR AHPARIGCDQ GFAYLHSAAP DANLLVGAVV GGPDARDGFV DDRDSYGQTE 480 PATYINAPLV GVLAYFAGTA KL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02613 | PLN02613 | 5.0e-163 | 38 | 494 | 460 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 5.0e-173 | 38 | 494 | 461 | + Glycosyl hydrolase family 9. | ||
| PLN03009 | PLN03009 | 6.0e-176 | 38 | 497 | 462 | + cellulase | ||
| PLN02266 | PLN02266 | 0 | 38 | 497 | 460 | + endoglucanase | ||
| PLN02308 | PLN02308 | 0 | 38 | 497 | 460 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA77239.1 | 0 | 8 | 497 | 6 | 491 | endo-1,4-beta glucanase [Populus alba] |
| GenBank | EAZ05384.1 | 0 | 24 | 501 | 28 | 504 | hypothetical protein OsI_27591 [Oryza sativa Indica Group] |
| GenBank | EAZ41304.1 | 0 | 24 | 501 | 28 | 504 | hypothetical protein OsJ_25815 [Oryza sativa Japonica Group] |
| RefSeq | NP_001060848.1 | 0 | 24 | 501 | 47 | 523 | Os08g0114200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002443762.1 | 0 | 1 | 502 | 1 | 502 | hypothetical protein SORBIDRAFT_07g001480 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4tf4_B | 0 | 29 | 494 | 3 | 438 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |
| PDB | 4tf4_A | 0 | 29 | 494 | 3 | 438 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |
| PDB | 3tf4_B | 0 | 29 | 494 | 3 | 438 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |
| PDB | 3tf4_A | 0 | 29 | 494 | 3 | 438 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |
| PDB | 1tf4_B | 0 | 29 | 494 | 3 | 438 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |
