| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb07g002140.1 |
| Family | GT92 |
| Protein Properties | Length: 589 Molecular Weight: 65189.4 Isoelectric Point: 9.8601 |
| Chromosome | Chromosome/Scaffold: 7 Start: 2300829 End: 2303159 |
| Description | zinc finger (C3HC4-type RING finger) family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT92 | 318 | 520 | 9.1e-21 |
| HSMCVCTMLRNQARFLREWIIYHSHIGVERWFIYDNNSDDDIEQALGTMDPSRYNVTRHLWPWMKSQEAGFAHCALRARESCEWVGFIDIDEFLHFPGNK TLQDILRNYSNRPRIGELRTACHSFGPSGRTKIPKKGVTTGYTCRLAAPERHKSIVRPDALNPSLINVVHHFHLKEGVRYVNLGQGVMLINHYKYQVWEV FKD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 589 Download |
| MAMSAKERKL SRLGSCKVTS AAGSGGGGGG SPAARGHRSP AAPQRRVFAA LFAFLCAGVV 60 VLGGVHVIGA SFRPVLRTAW PSATLNAISS DARAQQAGST ADAVLPSVQI QHAVAFPDRV 120 LLILKDGSSL PAPQRFECLY SPANSSELRR QPLLAASLPD GPSLVHCPAE PSGVDVSLSL 180 SLSPPVAPLQ WDRLVYTALV DSRDNSTIVF AKGMNLRPGR LGVASRYQCV FGRDLSKPKH 240 VLTSPVISAA QEIFRCVTPV RIRRYLRMTT NPNGNGDSDD KPMLVSIRTK GQRDSTLPSI 300 AEPEPLPRYN RHRRQKAHSM CVCTMLRNQA RFLREWIIYH SHIGVERWFI YDNNSDDDIE 360 QALGTMDPSR YNVTRHLWPW MKSQEAGFAH CALRARESCE WVGFIDIDEF LHFPGNKTLQ 420 DILRNYSNRP RIGELRTACH SFGPSGRTKI PKKGVTTGYT CRLAAPERHK SIVRPDALNP 480 SLINVVHHFH LKEGVRYVNL GQGVMLINHY KYQVWEVFKD KFSGRVATYV ADWQDEENVG 540 SRDRAPGLGT KPVEPEDWPR RFCEVFDTGL KDFVHKAFTD PATGSLPW* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13704 | Glyco_tranf_2_4 | 7.0e-12 | 327 | 423 | 99 | + Glycosyl transferase family 2. Members of this family of prokaryotic proteins include putative glucosyltransferases, | ||
| pfam01697 | Glyco_transf_92 | 2.0e-36 | 316 | 521 | 244 | + Glycosyltransferase family 92. Members of this family act as galactosyltransferases, belonging to glycosyltransferase family 92. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues. This is supported by the inclusion of this family in the GT-A glycosyl transferase superfamily. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN34109.1 | 0 | 1 | 588 | 1 | 598 | unknown [Zea mays] |
| DDBJ | BAD10590.1 | 0 | 100 | 588 | 3 | 491 | zinc finger (C3HC4-type RING finger) protein family-like [Oryza sativa Japonica Group] |
| GenBank | EEC82835.1 | 0 | 1 | 588 | 1 | 584 | hypothetical protein OsI_27644 [Oryza sativa Indica Group] |
| RefSeq | NP_001060883.1 | 0 | 1 | 588 | 1 | 584 | Os08g0121900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002444971.1 | 0 | 1 | 588 | 1 | 588 | hypothetical protein SORBIDRAFT_07g002140 [Sorghum bicolor] |
