y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb07g003140.1 |
Family | GT14 |
Protein Properties | Length: 433 Molecular Weight: 47980.4 Isoelectric Point: 6.2561 |
Chromosome | Chromosome/Scaffold: 7 Start: 3443538 End: 3447053 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 124 | 299 | 0 |
IAYLLEGTKGDGLRMRRTLQAIYHPRNQYILHLDLEAPPRERIDLAMYVKGDPMFSQVGNVRVIAKGNLVTYKGPTMVACTLHAVAILLKEGLQWDWFIN LSASDYPLMTQDDILHVFSSLPRNLNFIEHFRLSGWKVNIRAKPIVLDPGLYLSKKFDLTMTTERRELPTSFKLYT |
Full Sequence |
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Protein Sequence Length: 433 Download |
MRKNWGLSSG HARPFGDRRW LLPFLASLLV TATLLLAAAC GLFSPPYPSG AGDAALFDVV 60 SLADWDDGGG SSSGRDGAPS VEAGIKNRLL EGNAASDSDD DDDDENPDDA AVNSDDSDAE 120 PPRIAYLLEG TKGDGLRMRR TLQAIYHPRN QYILHLDLEA PPRERIDLAM YVKGDPMFSQ 180 VGNVRVIAKG NLVTYKGPTM VACTLHAVAI LLKEGLQWDW FINLSASDYP LMTQDDILHV 240 FSSLPRNLNF IEHFRLSGWK VNIRAKPIVL DPGLYLSKKF DLTMTTERRE LPTSFKLYTV 300 GPDLHYIAWD YPPKQHPLIL SMKDFNKMVK SGAPFARKFP KDDKVLDKID RELLHRSEGR 360 FTPGAWCDGS SEGGADPCLS RGEDSVFEPG PGAERLRGLM KKVLSWDYRN GSCSSLAYDQ 420 TKRDWYVPKS KG* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 7.0e-49 | 124 | 329 | 252 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 7.0e-125 | 122 | 404 | 338 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ41491.1 | 0 | 1 | 432 | 1 | 449 | hypothetical protein OsJ_26015 [Oryza sativa Japonica Group] |
RefSeq | NP_001060977.1 | 0 | 1 | 432 | 1 | 466 | Os08g0143500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147601.1 | 0 | 1 | 432 | 1 | 482 | xylosyltransferase 2 [Zea mays] |
RefSeq | XP_002443840.1 | 0 | 1 | 432 | 1 | 432 | hypothetical protein SORBIDRAFT_07g003140 [Sorghum bicolor] |
RefSeq | XP_002517977.1 | 0 | 1 | 414 | 7 | 439 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00001 | 140 | 238 | 101 | 193 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00001 | 140 | 238 | 101 | 193 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00001 | 140 | 238 | 101 | 193 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00001 | 140 | 238 | 101 | 193 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00003 | 140 | 238 | 101 | 193 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |