CAZyme Information

Basic Information
SpeciesSorghum bicolor
Cazyme IDSb07g009410.1
FamilyGH16
Protein PropertiesLength: 292 Molecular Weight: 32133.6 Isoelectric Point: 4.6291
ChromosomeChromosome/Scaffold: 7 Start: 16277780 End: 16279291
DescriptionXyloglucan endotransglucosylase/hydrolase family protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH16542115.6e-26
  SLVLDQSSGAGFNSTRKYLFGEFSVEMKLVAGNSAGTVTSFYLTSGEGDEHDEIDMEFMGNSSGSPTVLNTNVWASGDGKKEHQFYLWFDPAADFHKYKI
  TWNDKNIIFQVDDVTVRVFKRYADLPYPSSKPMAVHATLWDGSYWATEKGKVPIDWSR
Full Sequence
Protein Sequence     Length: 292     Download
MARPAAWTPP ALSLAVAVLC LVGRSTSAEF WLDEFTTDGD VRKDYDGSGR QVASLVLDQS    60
SGAGFNSTRK YLFGEFSVEM KLVAGNSAGT VTSFYLTSGE GDEHDEIDME FMGNSSGSPT    120
VLNTNVWASG DGKKEHQFYL WFDPAADFHK YKITWNDKNI IFQVDDVTVR VFKRYADLPY    180
PSSKPMAVHA TLWDGSYWAT EKGKVPIDWS RAPFVVSYRA YTANACAVGG GGGGSSSSCP    240
DAAGGNEWMD RQPDDTDRLT VEWARRNCLQ YNYCEDGWRF PQGFPGECAR N*            300
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd02183GH16_fungal_CRH1_transglycosylase9.0e-1844214184+
cd02175GH16_lichenase3.0e-1861196139+
pfam00722Glyco_hydro_161.0e-6251211162+
PLN03161PLN031611.0e-6855290241+
cd02176GH16_XET9.0e-11635288256+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005618cell wall
GO:0005975carbohydrate metabolic process
GO:0006073cellular glucan metabolic process
GO:0016762xyloglucan:xyloglucosyl transferase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACF85167.1012911287unknown [Zea mays]
GenBankACG39534.1012911290xyloglucan endotransglycosylase/hydrolase protein 8 precursor [Zea mays]
RefSeqNP_001130144.1012911287hypothetical protein LOC100191238 [Zea mays]
RefSeqXP_002445324.1012911291hypothetical protein SORBIDRAFT_07g009410 [Sorghum bicolor]
RefSeqXP_002447796.103129127287hypothetical protein SORBIDRAFT_06g015940 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1un1_B04829134275B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate
PDB1un1_A04829134275B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate
PDB1umz_B04829134275A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB1umz_A04829134275A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB2uwb_B05427941259A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
Signal Peptide
Cleavage Site
28
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CD437945268252920
DR799053261242840
DR798740251242740
EB708605250242730
EE042654251242740
Orthologous Group
SpeciesID
Brachypodium distachyonBradi1g09690.1Bradi1g09700.1Bradi3g18590.1Bradi3g18600.1Bradi5g20718.1
Oryza sativaLOC_Os08g13920.1
Panicum virgatumPavirv00014997mPavirv00060809mPavirv00011489mPavirv00022766mPavirv00032512m
Pavirv00011651mPavirv00065073mPavirv00039266mPavirv00018963mPavirv00059833m
Setaria italicaSi014242mSi014194mSi014232mSi014215mSi014233m
Sorghum bicolorSb06g015930.1Sb06g015880.1Sb06g015940.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny