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Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb07g014890.1 |
Family | GT8 |
Protein Properties | Length: 649 Molecular Weight: 73437.3 Isoelectric Point: 9.4633 |
Chromosome | Chromosome/Scaffold: 7 Start: 36579500 End: 36584849 |
Description | galacturonosyltransferase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 310 | 620 | 0 |
CLPLRLANEYFSLDPVRQQFPNQQKLINPKLYHYALFSDNILATAVVVNSTVLNAKHPSDHVFHIVTDKLNYAPMRMWFLSNPPGKATIEVQHIGEFTWL NDSYSPVLKQLGSPSMIDYYFGTNRANSDSNLKYRNPKYLSILNHLRFYLPEIYPKLDKMVFLDDDIVVKKDLTGLWSINMKGKVNGAVETCGESFHRYD RYLNFSNPIIAKSFDPHACGWAFGMNVFDLAEWRRQNITQIYHSWQKLNEDRSLWKLGTLPPGLITFWNKTFPLSRSWHVLGLGYNPHVNSRDIERAAVI HYNGNMKPWLE |
Full Sequence |
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Protein Sequence Length: 649 Download |
MARARGRLVL LLLLALTVLS PLALYTSRLP AALSPIQTQD FPGEITNQGR GGKADKLNAL 60 PLETVSSLKE PVGIVFSEEL TESKSQDLPL TKVGEHKSRM LSEVTVAADG TTLKADEVIE 120 QVTTLEPQDG SLVKGAGISD EQEKNIGSQQ QSSSEESSQD TMLKQTPEKV IVENSQSAKT 180 DGKTKITVLP DVRIRNIKDQ LIKAKVYLGL GSIRANSQYL KDLRQRIREV QKVLGDASKD 240 SDLLKNANEK VKALEQMLIK GKQMQDDCSI VVKKLRAMLH SAEEQLHAHK KQTVFLTQLA 300 AKTLPKGLHC LPLRLANEYF SLDPVRQQFP NQQKLINPKL YHYALFSDNI LATAVVVNST 360 VLNAKHPSDH VFHIVTDKLN YAPMRMWFLS NPPGKATIEV QHIGEFTWLN DSYSPVLKQL 420 GSPSMIDYYF GTNRANSDSN LKYRNPKYLS ILNHLRFYLP EIYPKLDKMV FLDDDIVVKK 480 DLTGLWSINM KGKVNGAVET CGESFHRYDR YLNFSNPIIA KSFDPHACGW AFGMNVFDLA 540 EWRRQNITQI YHSWQKLNED RSLWKLGTLP PGLITFWNKT FPLSRSWHVL GLGYNPHVNS 600 RDIERAAVIH YNGNMKPWLE IGLPKYRSYW SKYLDYDQSF LRECNINP* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 0 | 2 | 648 | 650 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 0 | 191 | 647 | 461 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 195 | 646 | 457 | + Probable galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 191 | 646 | 459 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 0 | 243 | 648 | 412 | + galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN31213.1 | 0 | 27 | 648 | 28 | 649 | unknown [Zea mays] |
GenBank | EEC83383.1 | 0 | 37 | 648 | 6 | 621 | hypothetical protein OsI_28798 [Oryza sativa Indica Group] |
RefSeq | NP_001061555.1 | 0 | 20 | 648 | 20 | 643 | Os08g0327100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148932.1 | 0 | 27 | 648 | 28 | 648 | transferase, transferring glycosyl groups [Zea mays] |
RefSeq | XP_002444200.1 | 0 | 1 | 648 | 1 | 648 | hypothetical protein SORBIDRAFT_07g014890 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.0007 | 445 | 618 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.0008 | 445 | 618 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.0008 | 445 | 618 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |