| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb07g019420.1 |
| Family | GT31 |
| Protein Properties | Length: 347 Molecular Weight: 38895.3 Isoelectric Point: 8.67 |
| Chromosome | Chromosome/Scaffold: 7 Start: 50034422 End: 50039593 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 134 | 328 | 0 |
| RDAVRKSWLPTGSMLKKLEEEKGIVVRFVVGRSANRGDTFDREIDEENRSTRDFLILDDHIESDEEHPKKTKSFFANAADTFDAAFYAKVNDDIYINVDT LSAMLETHWDKPRVYIGCMKSGEVFSDSTHKWYEPDWWKFGDGKSYFRHASGEMFVISRAIAQFISINKSVLRTYAHDDVSVGSWMIGLAVKHVN | |||
| Full Sequence |
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| Protein Sequence Length: 347 Download |
| MQIREGPARR QAPSAVGALR SPMSAMMLAM FATMASFYVA GRLWQDAQNR VYLIKELDRR 60 TGQGQSAISV DDTLKVVACR QQGKRLASLE MELAAAKHEG FVGKYNPETN GTHSGKKPLI 120 VIGIMTSFGR KNYRDAVRKS WLPTGSMLKK LEEEKGIVVR FVVGRSANRG DTFDREIDEE 180 NRSTRDFLIL DDHIESDEEH PKKTKSFFAN AADTFDAAFY AKVNDDIYIN VDTLSAMLET 240 HWDKPRVYIG CMKSGEVFSD STHKWYEPDW WKFGDGKSYF RHASGEMFVI SRAIAQFISI 300 NKSVLRTYAH DDVSVGSWMI GLAVKHVNEA KLCCSSWPSG AMCSAL* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02434 | Fringe | 0.002 | 223 | 328 | 120 | + Fringe-like. The drosophila protein fringe (FNG) is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands. FNG is localised to the Golgi apparatus (not secreted as previously thought). Modification of Notch occurs through glycosylation by FNG. The xenopus homologue, lunatic fringe, has been implicated in a variety of functions. | ||
| pfam13334 | DUF4094 | 7.0e-18 | 21 | 99 | 91 | + Domain of unknown function (DUF4094). This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. | ||
| pfam01762 | Galactosyl_T | 4.0e-32 | 134 | 328 | 201 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03193 | PLN03193 | 3.0e-76 | 84 | 338 | 262 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG35455.1 | 0 | 1 | 346 | 1 | 346 | beta-1,3-galactosyltransferase sqv-2 [Zea mays] |
| GenBank | EEE68617.1 | 0 | 1 | 346 | 1 | 343 | hypothetical protein OsJ_27160 [Oryza sativa Japonica Group] |
| RefSeq | NP_001061709.1 | 0 | 1 | 346 | 1 | 343 | Os08g0386700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001149441.1 | 0 | 1 | 346 | 1 | 346 | beta-1,3-galactosyltransferase sqv-2 [Zea mays] |
| RefSeq | XP_002444279.1 | 0 | 1 | 346 | 1 | 346 | hypothetical protein SORBIDRAFT_07g019420 [Sorghum bicolor] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO795993 | 277 | 42 | 318 | 0 |
| GR366138 | 272 | 21 | 292 | 0 |
| GT045304 | 267 | 81 | 347 | 0 |
| JG909389 | 256 | 92 | 347 | 0 |
| HO796715 | 334 | 14 | 347 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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