| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb07g021480.1 |
| Family | GT47 |
| Protein Properties | Length: 540 Molecular Weight: 60679.9 Isoelectric Point: 10.3926 |
| Chromosome | Chromosome/Scaffold: 7 Start: 55530121 End: 55532024 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 130 | 477 | 0 |
| AALRVYVYDLPAEFHFGMLGWDGKGKPAAWPDVRDARAAPHYPGGLNLQHSVAYWLTLDILSSALPPGTGTGSDDVVIRDRPCVAVRVTNASLADVFFVP FFASLSYNRHSKLRRGEKVNRNRFLQAELVRYLMRKEEWRRWGGKNHLIVPHHPNSMMEARKKLSAAMFVLSDFGRYSPHVANLKKDVIAPYMHVVRSFG DGDSPAFDQRPILAYFQGAIHRKAVRALCSVLVANRPAFQGGKVRQKLYQLLKDERDVHFTYGSVRQNGIRRATAGMSTSKFCLNIAGDTPSSNRLFDAI VSHCVPVIISDDIELPFEDVLDYSEFCVFVRSADAAKRGFLLRLLRGI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 540 Download |
| MVVVVVVERK MQPLPPPEHR RALRFVVFMA VSLLALSCWA LVNSRINVAM PYSAFVMRDV 60 VDKTPALTVT GVEDRHPAGL DPASSTSVPA TSDATSGSVK LSGPVIRREP LAGERERRER 120 SETRCDADSA ALRVYVYDLP AEFHFGMLGW DGKGKPAAWP DVRDARAAPH YPGGLNLQHS 180 VAYWLTLDIL SSALPPGTGT GSDDVVIRDR PCVAVRVTNA SLADVFFVPF FASLSYNRHS 240 KLRRGEKVNR NRFLQAELVR YLMRKEEWRR WGGKNHLIVP HHPNSMMEAR KKLSAAMFVL 300 SDFGRYSPHV ANLKKDVIAP YMHVVRSFGD GDSPAFDQRP ILAYFQGAIH RKAVRALCSV 360 LVANRPAFQG GKVRQKLYQL LKDERDVHFT YGSVRQNGIR RATAGMSTSK FCLNIAGDTP 420 SSNRLFDAIV SHCVPVIISD DIELPFEDVL DYSEFCVFVR SADAAKRGFL LRLLRGISRD 480 EWTKMWMRLK KVTRHFEYQY PSRSGDAVQM IWSAVARKMH SVQLQLHKRG RFQRTGSES* 540 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 1.0e-52 | 132 | 472 | 346 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC83632.1 | 0 | 1 | 539 | 49 | 566 | hypothetical protein OsI_29363 [Oryza sativa Indica Group] |
| RefSeq | NP_001061895.1 | 0 | 1 | 539 | 49 | 566 | Os08g0438600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002284930.1 | 0 | 125 | 535 | 66 | 448 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002284932.1 | 0 | 97 | 535 | 5 | 409 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002444408.1 | 0 | 1 | 539 | 1 | 539 | hypothetical protein SORBIDRAFT_07g021480 [Sorghum bicolor] |
