| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb07g022090.1 |
| Family | CE8 |
| Protein Properties | Length: 585 Molecular Weight: 60954.4 Isoelectric Point: 6.121 |
| Chromosome | Chromosome/Scaffold: 7 Start: 56373801 End: 56378819 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 262 | 567 | 0 |
| AVVAQDGSGNFTTVSAAVDAAPSQSAARHVIYVKKGVYRETVEVKKKKWNLMLVGDGMGVTVISGHRSYVDGYTTYRSATVAVSGKGFIARDLTFENTAG PSKHQAVALRCDSDLSVFYRCGFEGYQDTLYAHSLRHFYRDCRVTGTVDFVFGNAAAVFQNCSLLPRRPLPDQKNSVTAQGRLDANMTTGFAFQFCNVSA HPELLLNNATAAAAAAPPTQTQTYLGRPWKQYSRVVFMQSYIGDLVRPEGWLAWDGDFALDTLYYGEYSNTGPGAGVAARVKWPGFHVMTSAAEAGNFTV AQFIEG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 585 Download |
| MASTSTSTFP RATAPQLLLL VLSLLLAAAS ASSLLPPLNN AHPQRPSPVA KAREEEGGGG 60 SAGLISTLRE TLDAIRDVAS IISSFPISVG GGILGGGAGD LRLSSAVADC LDLLDLSSDE 120 LSWSMSTTTS SSDGYSPASA GAGAGAGGRV VGTGDDRSDL RSWLSGALGN QDTCKEGLDE 180 TGSPLASLVA TGLDAVTSLL ADGLGQVAAE EAVAAEEAVA ASSASSRRGA LGAAAPPPRW 240 VRARERRLLQ MPVGPGGLAV DAVVAQDGSG NFTTVSAAVD AAPSQSAARH VIYVKKGVYR 300 ETVEVKKKKW NLMLVGDGMG VTVISGHRSY VDGYTTYRSA TVAVSGKGFI ARDLTFENTA 360 GPSKHQAVAL RCDSDLSVFY RCGFEGYQDT LYAHSLRHFY RDCRVTGTVD FVFGNAAAVF 420 QNCSLLPRRP LPDQKNSVTA QGRLDANMTT GFAFQFCNVS AHPELLLNNA TAAAAAAPPT 480 QTQTYLGRPW KQYSRVVFMQ SYIGDLVRPE GWLAWDGDFA LDTLYYGEYS NTGPGAGVAA 540 RVKWPGFHVM TSAAEAGNFT VAQFIEGNMW LPPTGVKYTA GLTS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02301 | PLN02301 | 2.0e-152 | 255 | 582 | 328 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02506 | PLN02506 | 3.0e-155 | 160 | 584 | 425 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02201 | PLN02201 | 0 | 160 | 584 | 425 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 261 | 568 | 308 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ07184.1 | 0 | 64 | 584 | 55 | 560 | hypothetical protein OsI_29430 [Oryza sativa Indica Group] |
| RefSeq | NP_001061940.1 | 0 | 64 | 584 | 55 | 557 | Os08g0450100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147569.1 | 0 | 54 | 584 | 47 | 559 | pectinesterase PPE8B [Zea mays] |
| Swiss-Prot | Q43062 | 0 | 67 | 580 | 59 | 518 | PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase inhibitor PPE8B; AltName: Full=Pectin methylesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase PPE8B; Short=PE PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags: Precursor |
| RefSeq | XP_002444448.1 | 0 | 1 | 584 | 1 | 584 | hypothetical protein SORBIDRAFT_07g022090 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 258 | 582 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 253 | 582 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 2e-19 | 261 | 490 | 5 | 245 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 2e-19 | 261 | 490 | 5 | 245 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 2e-19 | 261 | 490 | 5 | 245 | A Chain A, Pectin Methylesterase From Carrot |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
