| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb07g022100.1 |
| Family | CE8 |
| Protein Properties | Length: 627 Molecular Weight: 67835.9 Isoelectric Point: 9.1243 |
| Chromosome | Chromosome/Scaffold: 7 Start: 56379661 End: 56381793 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 312 | 608 | 0 |
| NVVVAKDGSGKFKTINDALNAMPKQYTGRYLIYVKQGVYQEYVTITRAMENVTMYGDGAMKTVITGSRNFADGLTTYKTATFNVQGDGFIAIALGFRNTA GAAKHQAVALLVQSDRSIFLNCRMDAYQDTLYAHSKAQFYRNCVISGTIDFVFGDAAAVFQNCILLLRRPLDSQQNIATAQGRADGRESTGFVFQYCRFA AEAGLRDASRPPIRSYLARPWREFSRTLIMESEIPAFIDKAGYLPWNGDFGLKTLWYAEYGNRGPGADTAGRVAWPGYKKVISKEEADKFTVQNFLH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 627 Download |
| MSTAFSDFGP LTERRRVERQ RQQRRRVMLA AGAASIVLIL IVMGGAAVAY NASVQDESSS 60 SSSSPSSSSS SGGGGGGSGS KSNLISASKS VKMMCSQTDY KDACEKSLSK AAAAANASAS 120 SPKDMVRAAV AVIGDALADA FNRSEVIKSD DPRVKAAVAD CKEIYQNAKD DLGRTLHGID 180 AGGMNGVAKH NYELRVLLSA VIAHMETCID GFPDGGHLKK QMTATMESGK ELTSNALAII 240 EKASSVLVAL HIPGFTAHRR LLGDNDEAEN MENQPEVKHS GMSLGELEDE AMAADKRRLL 300 KGNNFQAKLR PNVVVAKDGS GKFKTINDAL NAMPKQYTGR YLIYVKQGVY QEYVTITRAM 360 ENVTMYGDGA MKTVITGSRN FADGLTTYKT ATFNVQGDGF IAIALGFRNT AGAAKHQAVA 420 LLVQSDRSIF LNCRMDAYQD TLYAHSKAQF YRNCVISGTI DFVFGDAAAV FQNCILLLRR 480 PLDSQQNIAT AQGRADGRES TGFVFQYCRF AAEAGLRDAS RPPIRSYLAR PWREFSRTLI 540 MESEIPAFID KAGYLPWNGD FGLKTLWYAE YGNRGPGADT AGRVAWPGYK KVISKEEADK 600 FTVQNFLHAE PWLKPTGTPV KYGFWA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02468 | PLN02468 | 1.0e-147 | 86 | 624 | 543 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02217 | PLN02217 | 3.0e-150 | 85 | 626 | 546 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 5.0e-151 | 85 | 619 | 547 | + pectinesterase | ||
| pfam01095 | Pectinesterase | 2.0e-178 | 312 | 607 | 296 | + Pectinesterase. | ||
| PLN02745 | PLN02745 | 0 | 4 | 625 | 624 | + Putative pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN34013.1 | 0 | 2 | 625 | 3 | 629 | unknown [Zea mays] |
| GenBank | EAZ07185.1 | 0 | 1 | 626 | 1 | 663 | hypothetical protein OsI_29431 [Oryza sativa Indica Group] |
| RefSeq | NP_001061941.1 | 0 | 1 | 626 | 1 | 664 | Os08g0450200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001063246.1 | 0 | 1 | 625 | 1 | 616 | Os09g0433700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002445591.1 | 0 | 1 | 626 | 1 | 626 | hypothetical protein SORBIDRAFT_07g022100 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 311 | 624 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 312 | 617 | 4 | 308 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 2e-20 | 312 | 533 | 5 | 246 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 2e-20 | 312 | 533 | 5 | 246 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 2e-20 | 312 | 533 | 5 | 246 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
