| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb07g024110.1 |
| Family | GT41 |
| Protein Properties | Length: 911 Molecular Weight: 100974 Isoelectric Point: 5.8593 |
| Chromosome | Chromosome/Scaffold: 7 Start: 59108697 End: 59114721 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT41 | 348 | 838 | 0 |
| SIKPLFAQSLNNLGVVYTVQGKMDSAASMIEKAIHANPTYAEAYNNLGVLYRDAGSITLAIHAYERCLQIDPDSRNAGQNRLLAMNYIDEGSDDKLYEAH REWGKRFMKLYPQYTCWDNTKVADRPLIIGYLSPDYFTHSVSYFIEAPLTHHDYTNCKVVVYSGVVKADAKTLRFKDRVLKKGGLWRDIYGIDEKRVASL VREDKVDILVELTGHTANNKLGTMACRPAPIQVTWIGYPNTTGLPTIDYRISDSLADPPITKQKHVEELVRLPESFLCYTPSPEAGPICPTPAISNGFVT FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCENIRQKFLSTLEELGLESLRVDLLPLIHLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYM GVPCVTMAGAVHAHNVGVSLLSKVGLGRLVAKTEDEYVSLALGLASDVNALQELRMSLRELMMKSPVCDGEKFTRGLEAAYRDMWRRYCDG | |||
| Full Sequence |
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| Protein Sequence Length: 911 Download |
| MGQPGTDSVL GKESNGIVPN LNGGVSAAKQ QLEGKEALRY ANILRSRNKF TDAVNLYNIV 60 LEKEGTNVEA LIGKGICLQA QNLPRQAIEC FTEVVKIEPG NACALTHCGM IYKDEGHLVE 120 AAEAYQKART ADPSYKPASE LLAIVLTDLG TSLKLAGNTE EGIQKYCEAL EVDNHYAPAY 180 YNLGVVYSEM MQFEMALSCY EKAALERPLY AEAYCNMGVI YKNRGDLEAA IACYERCLTI 240 SPNFEIAKNN MAIALTDLGT KVKIEGDINQ GVAYYKKALF YNWHYADAMY NLGVAYGEML 300 NFEMAIVFYE LALHFNPRCA EACNNLGVIY KDRDNLDKAV ECYQMALSIK PLFAQSLNNL 360 GVVYTVQGKM DSAASMIEKA IHANPTYAEA YNNLGVLYRD AGSITLAIHA YERCLQIDPD 420 SRNAGQNRLL AMNYIDEGSD DKLYEAHREW GKRFMKLYPQ YTCWDNTKVA DRPLIIGYLS 480 PDYFTHSVSY FIEAPLTHHD YTNCKVVVYS GVVKADAKTL RFKDRVLKKG GLWRDIYGID 540 EKRVASLVRE DKVDILVELT GHTANNKLGT MACRPAPIQV TWIGYPNTTG LPTIDYRISD 600 SLADPPITKQ KHVEELVRLP ESFLCYTPSP EAGPICPTPA ISNGFVTFGS FNNLAKITPK 660 VLQVWARILC AVPNSRLVVK CKPFCCENIR QKFLSTLEEL GLESLRVDLL PLIHLNHDHM 720 QAYSLMDISL DTFPYAGTTT TCESLYMGVP CVTMAGAVHA HNVGVSLLSK VGLGRLVAKT 780 EDEYVSLALG LASDVNALQE LRMSLRELMM KSPVCDGEKF TRGLEAAYRD MWRRYCDGDV 840 PSLRRLELLE EHPVVNKPDS DKTSEKLADL KAQRAGVTVE EDKQPPIMAN GVRSPDSPAP 900 AKCEANGNSG * 960 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13844 | Glyco_transf_41 | 1.0e-16 | 474 | 623 | 153 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
| TIGR02917 | PEP_TPR_lipo | 5.0e-21 | 26 | 433 | 412 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | ||
| pfam13844 | Glyco_transf_41 | 2.0e-21 | 646 | 832 | 187 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
| COG3914 | Spy | 1.0e-90 | 305 | 835 | 559 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| GO:0042802 | identical protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC84033.1 | 0 | 7 | 908 | 2 | 944 | hypothetical protein OsI_30264 [Oryza sativa Indica Group] |
| GenBank | EEE69149.1 | 0 | 7 | 908 | 2 | 944 | hypothetical protein OsJ_28275 [Oryza sativa Japonica Group] |
| RefSeq | NP_001062501.1 | 0 | 1 | 908 | 1 | 924 | Os08g0559300 [Oryza sativa (japonica cultivar-group)] |
| Swiss-Prot | O82422 | 0 | 7 | 909 | 2 | 942 | SPY_HORVU RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; AltName: Full=HvSPY |
| RefSeq | XP_002445679.1 | 0 | 1 | 910 | 1 | 910 | hypothetical protein SORBIDRAFT_07g024110 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1w3b_B | 1e-36 | 71 | 395 | 37 | 380 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| PDB | 1w3b_B | 5e-28 | 107 | 427 | 21 | 344 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| PDB | 1w3b_B | 5e-21 | 75 | 332 | 142 | 385 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| PDB | 1w3b_B | 0.0000000007 | 68 | 258 | 203 | 386 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| PDB | 1w3b_B | 0.00000001 | 42 | 226 | 211 | 388 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GT041789 | 337 | 331 | 667 | 0 |
| GT041789 | 109 | 158 | 264 | 0.00000000001 |
| GT041789 | 125 | 222 | 344 | 0.00000007 |
| GT041789 | 85 | 267 | 351 | 0.0001 |
| GT041789 | 126 | 45 | 168 | 0.89 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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