| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb07g026130.1 |
| Family | AA2 |
| Protein Properties | Length: 337 Molecular Weight: 36477.9 Isoelectric Point: 8.1911 |
| Chromosome | Chromosome/Scaffold: 7 Start: 61317244 End: 61320426 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 49 | 319 | 0 |
| SIVRYEVTRKKNETVVTIPATLRLAFHDCMVGGCNAAVLIASKKNDAEKDAPDNESLAGDGFDTINRVKAAVEKKCPGVVSCADIIALATRDVVYLADGP YWRVELGRLDALASRASDVKGKLPDPDMHVKELMPVFQRNGFTKVDLVALSGAHTVGFAHCSRFTNRLYSYGGTSSRTDPTFNPDYAGQLKGACPVNVGP TIAVNMDPVSPIKFDNIYFINLQYGLGLFTSDQVLYTDETTRPIVDKFAASQKEFFDAFVAAMIKLGRLGV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 337 Download |
| MEKRRRGGVS SLMVLAAALL TVAAMPPPPR VAAALSPDYY KDSCPDLESI VRYEVTRKKN 60 ETVVTIPATL RLAFHDCMVG GCNAAVLIAS KKNDAEKDAP DNESLAGDGF DTINRVKAAV 120 EKKCPGVVSC ADIIALATRD VVYLADGPYW RVELGRLDAL ASRASDVKGK LPDPDMHVKE 180 LMPVFQRNGF TKVDLVALSG AHTVGFAHCS RFTNRLYSYG GTSSRTDPTF NPDYAGQLKG 240 ACPVNVGPTI AVNMDPVSPI KFDNIYFINL QYGLGLFTSD QVLYTDETTR PIVDKFAASQ 300 KEFFDAFVAA MIKLGRLGVK TGKDGEIRRV CTAFNH* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00141 | peroxidase | 5.0e-6 | 268 | 299 | 32 | + Peroxidase. | ||
| cd00691 | ascorbate_peroxidase | 5.0e-30 | 67 | 320 | 272 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
| pfam00141 | peroxidase | 6.0e-59 | 51 | 204 | 154 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 4.0e-74 | 39 | 335 | 301 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 4.0e-157 | 35 | 334 | 301 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD11654.1 | 0 | 35 | 336 | 33 | 333 | putative peroxidase [Oryza sativa Japonica Group] |
| RefSeq | NP_001062342.1 | 0 | 35 | 336 | 39 | 339 | Os08g0532700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001131174.1 | 0 | 78 | 336 | 1 | 257 | hypothetical protein LOC100192482 [Zea mays] |
| RefSeq | XP_002444695.1 | 0 | 1 | 336 | 1 | 336 | hypothetical protein SORBIDRAFT_07g026130 [Sorghum bicolor] |
| RefSeq | XP_002462635.1 | 0 | 33 | 336 | 31 | 337 | hypothetical protein SORBIDRAFT_02g029340 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1bgp_A | 0 | 29 | 335 | 3 | 305 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |
| PDB | 3hdl_A | 0 | 35 | 335 | 2 | 303 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 1qo4_A | 0 | 35 | 335 | 3 | 304 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 1pa2_A | 0 | 35 | 335 | 3 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 3atj_B | 0 | 35 | 335 | 3 | 306 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
