CAZyme Information

Basic Information
SpeciesSorghum bicolor
Cazyme IDSb08g000720.1
FamilyAA1
Protein PropertiesLength: 324 Molecular Weight: 34950.7 Isoelectric Point: 8.8379
ChromosomeChromosome/Scaffold: 8 Start: 634595 End: 636034
Descriptionlaccase 12
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
AA1633050
  VYLAARAYASAQGVPFDNTTTTAIFDYGTTAAANNTSSPAMPTFPAYNDTATVTSFTTSLRGLRKAELPARVDESLFFTVGVGLFNCSSGETCSGPNNTR
  FAANMNNVSFVLPSTTSILQAHYASGGATSAPAGVFTADFPANPPVTFDYTAQNVSRALWQPVPGTRVYRLKYGAAVQLVLQGTNVFAAENHPIHLHGYD
  FYILAEGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVED
Full Sequence
Protein Sequence     Length: 324     Download
MPSFISTSTA LDGKKHKRRK NKRTKDKEGL GRTKDKKILT FRASLETQIP KLMTGPRRPL    60
LPVYLAARAY ASAQGVPFDN TTTTAIFDYG TTAAANNTSS PAMPTFPAYN DTATVTSFTT    120
SLRGLRKAEL PARVDESLFF TVGVGLFNCS SGETCSGPNN TRFAANMNNV SFVLPSTTSI    180
LQAHYASGGA TSAPAGVFTA DFPANPPVTF DYTAQNVSRA LWQPVPGTRV YRLKYGAAVQ    240
LVLQGTNVFA AENHPIHLHG YDFYILAEGW AVIRFVADNP GVWLMHCHLD VHITWGLAMA    300
FLVEDGVGEL ESLEAPPADL PVC* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
PLN02604PLN026046.0e-18166312189+
TIGR03388ascorbase2.0e-2380307270+
pfam07731Cu-oxidase_21.0e-29201307138+
TIGR03389laccase3.0e-11064323294+
Gene Ontology
GO TermDescription
GO:0005507copper ion binding
GO:0016491oxidoreductase activity
GO:0055114oxidation-reduction process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
DDBJBAF27393.2064323237522Os11g0108700 [Oryza sativa Japonica Group]
RefSeqNP_001065548.1064323282567Os11g0108700 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001065948.1064323282567Os12g0108000 [Oryza sativa (japonica cultivar-group)]
RefSeqXP_002441684.1013231323hypothetical protein SORBIDRAFT_08g000720 [Sorghum bicolor]
RefSeqXP_002448873.1064323300587hypothetical protein SORBIDRAFT_05g000680 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1asq_B8e-1786301295521A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
PDB1asq_A8e-1786301295521A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
PDB1asp_B8e-1786301295521A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
FF3598322551013240
GT739755284753240
EX381405284573060
DR178837285643140
HS0659592461123240
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_009_00805.1
Brassica rapaBra005698.306.628Bra005698.306.628
Capsella rubellaCarubv10002796m
Citrus sinensisorange1.1g016876m
Eucalyptus grandisEucgr.B00926.1Eucgr.L00618.1Eucgr.C03119.1Eucgr.D00739.2Eucgr.D00739.1
Eucgr.C04047.1Eucgr.F02651.1Eucgr.E04215.1
Fragaria vescamrna17622.1-v1.0-hybridmrna20734.1-v1.0-hybrid.267.525mrna20734.1-v1.0-hybrid.267.525
Linum usitatissimumLus10042249Lus10026401Lus10006157.329.565Lus10006157.329.565
Malus domesticaMDP0000478260MDP0000126274.271.513MDP0000126274.271.513MDP0000192322.262.504MDP0000192322.262.504
MDP0000226556.262.504MDP0000226556.262.504MDP0000139079MDP0000258933.740.941MDP0000258933.740.941
Manihot esculentacassava4.1_011108mcassava4.1_012403m
Medicago truncatulaMedtr3g071890.2
Oryza sativaLOC_Os10g30140.1LOC_Os01g27700.1LOC_Os03g18640.1
Panicum virgatumPavirv00067346m.355.586Pavirv00011031mPavirv00044566mPavirv00002879mPavirv00051916m
Pavirv00063725mPavirv00032843mPavirv00067346m.355.586Pavirv00051097m
Picea abiesMA_97119g0020MA_63042g0010MA_10191230g0010MA_7035458g0010MA_812936g0010
MA_115131g0010MA_8558020g0010MA_73829g0020MA_945295g0010MA_775445g0010
MA_21316g0010.255.559MA_21316g0010.255.559MA_8210355g0010
Populus trichocarpaPotri.013G152700.3
Ricinus communis28644.m000936
Setaria italicaSi034761m.360.589Si034761m.360.589
Vitis viniferaGSVIVT01034822001.347.597GSVIVT01034822001.347.597GSVIVT01012745001GSVIVT01034820001GSVIVT01012746001
GSVIVT01034822001.12.242GSVIVT01034822001.12.242GSVIVT01034833001GSVIVT01013687001.88.319GSVIVT01013687001.88.319
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny