| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb08g000720.1 |
| Family | AA1 |
| Protein Properties | Length: 324 Molecular Weight: 34950.7 Isoelectric Point: 8.8379 |
| Chromosome | Chromosome/Scaffold: 8 Start: 634595 End: 636034 |
| Description | laccase 12 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 63 | 305 | 0 |
| VYLAARAYASAQGVPFDNTTTTAIFDYGTTAAANNTSSPAMPTFPAYNDTATVTSFTTSLRGLRKAELPARVDESLFFTVGVGLFNCSSGETCSGPNNTR FAANMNNVSFVLPSTTSILQAHYASGGATSAPAGVFTADFPANPPVTFDYTAQNVSRALWQPVPGTRVYRLKYGAAVQLVLQGTNVFAAENHPIHLHGYD FYILAEGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVED | |||
| Full Sequence |
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| Protein Sequence Length: 324 Download |
| MPSFISTSTA LDGKKHKRRK NKRTKDKEGL GRTKDKKILT FRASLETQIP KLMTGPRRPL 60 LPVYLAARAY ASAQGVPFDN TTTTAIFDYG TTAAANNTSS PAMPTFPAYN DTATVTSFTT 120 SLRGLRKAEL PARVDESLFF TVGVGLFNCS SGETCSGPNN TRFAANMNNV SFVLPSTTSI 180 LQAHYASGGA TSAPAGVFTA DFPANPPVTF DYTAQNVSRA LWQPVPGTRV YRLKYGAAVQ 240 LVLQGTNVFA AENHPIHLHG YDFYILAEGW AVIRFVADNP GVWLMHCHLD VHITWGLAMA 300 FLVEDGVGEL ESLEAPPADL PVC* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02604 | PLN02604 | 6.0e-18 | 166 | 312 | 189 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 2.0e-23 | 80 | 307 | 270 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| pfam07731 | Cu-oxidase_2 | 1.0e-29 | 201 | 307 | 138 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03389 | laccase | 3.0e-110 | 64 | 323 | 294 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF27393.2 | 0 | 64 | 323 | 237 | 522 | Os11g0108700 [Oryza sativa Japonica Group] |
| RefSeq | NP_001065548.1 | 0 | 64 | 323 | 282 | 567 | Os11g0108700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001065948.1 | 0 | 64 | 323 | 282 | 567 | Os12g0108000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002441684.1 | 0 | 1 | 323 | 1 | 323 | hypothetical protein SORBIDRAFT_08g000720 [Sorghum bicolor] |
| RefSeq | XP_002448873.1 | 0 | 64 | 323 | 300 | 587 | hypothetical protein SORBIDRAFT_05g000680 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 8e-17 | 86 | 301 | 295 | 521 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 1asq_A | 8e-17 | 86 | 301 | 295 | 521 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 1asp_B | 8e-17 | 86 | 301 | 295 | 521 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FF359832 | 255 | 101 | 324 | 0 |
| GT739755 | 284 | 75 | 324 | 0 |
| EX381405 | 284 | 57 | 306 | 0 |
| DR178837 | 285 | 64 | 314 | 0 |
| HS065959 | 246 | 112 | 324 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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