| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb08g004880.1 |
| Family | AA2 |
| Protein Properties | Length: 314 Molecular Weight: 34085.6 Isoelectric Point: 7.3441 |
| Chromosome | Chromosome/Scaffold: 8 Start: 6062693 End: 6066807 |
| Description | stromal ascorbate peroxidase |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 53 | 302 | 0 |
| DVRQLLKATSCHPILVRLGWHDAGTYDKNIPEWPKCGGANGSLRFEVELKHGANAGLVNALKLIQSIKDKFSGVTYADLFQLASATAIEEAGGPKIPMIY GRVDVTAPEQCPPEGRLPAAGPPSPAEHLREVFYRMGLNDKEIVALSGAHTLGRARPERSGWGKPETKYTKDGPGAPGGQSWTSQWLKFDNSYFKAIKER RDEDLLVLPTDAVLFEDSSFKIYAEKYATDQDAFFEDYAEAHAKLSNLGA | |||
| Full Sequence |
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| Protein Sequence Length: 314 Download |
| MAVHHLLRRG VSSGSPIHPL RGLFLASKEL GRHPLSSAAA GDAAAELRSA REDVRQLLKA 60 TSCHPILVRL GWHDAGTYDK NIPEWPKCGG ANGSLRFEVE LKHGANAGLV NALKLIQSIK 120 DKFSGVTYAD LFQLASATAI EEAGGPKIPM IYGRVDVTAP EQCPPEGRLP AAGPPSPAEH 180 LREVFYRMGL NDKEIVALSG AHTLGRARPE RSGWGKPETK YTKDGPGAPG GQSWTSQWLK 240 FDNSYFKAIK ERRDEDLLVL PTDAVLFEDS SFKIYAEKYA TDQDAFFEDY AEAHAKLSNL 300 GAKFDPPKGI SLE* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00141 | peroxidase | 1.0e-49 | 51 | 282 | 240 | + Peroxidase. | ||
| PLN02364 | PLN02364 | 6.0e-65 | 51 | 301 | 252 | + L-ascorbate peroxidase 1 | ||
| PLN02879 | PLN02879 | 4.0e-67 | 51 | 301 | 251 | + L-ascorbate peroxidase | ||
| PLN02608 | PLN02608 | 2.0e-95 | 51 | 307 | 259 | + L-ascorbate peroxidase | ||
| cd00691 | ascorbate_peroxidase | 6.0e-141 | 51 | 305 | 259 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN27920.1 | 0 | 1 | 313 | 1 | 313 | unknown [Zea mays] |
| GenBank | EEC68950.1 | 0 | 2 | 313 | 3 | 319 | hypothetical protein OsI_37673 [Oryza sativa Indica Group] |
| RefSeq | NP_001066305.1 | 0 | 2 | 313 | 3 | 309 | Os12g0178100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001066306.1 | 0 | 2 | 313 | 3 | 320 | Os12g0178200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002441920.1 | 0 | 1 | 313 | 1 | 313 | hypothetical protein SORBIDRAFT_08g004880 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1iyn_A | 0 | 40 | 313 | 1 | 274 | A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability |
| PDB | 1apx_D | 0 | 42 | 301 | 10 | 245 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 1apx_C | 0 | 42 | 301 | 10 | 245 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 1apx_B | 0 | 42 | 301 | 10 | 245 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 1apx_A | 0 | 42 | 301 | 10 | 245 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| L-ascorbate degradation III | RXN-12440 | EC-1.11.1.11 | L-ascorbate peroxidase |
| L-ascorbate degradation V | RXN-12440 | EC-1.11.1.11 | L-ascorbate peroxidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DR736540 | 302 | 1 | 302 | 0 |
| EB813266 | 289 | 1 | 289 | 0 |
| DR964321 | 287 | 1 | 287 | 0 |
| DR963660 | 286 | 1 | 286 | 0 |
| DR964321 | 19 | 286 | 304 | 0.24 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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