| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb08g007570.1 |
| Family | GH1 |
| Protein Properties | Length: 566 Molecular Weight: 63799.9 Isoelectric Point: 6.7574 |
| Chromosome | Chromosome/Scaffold: 8 Start: 13351340 End: 13355948 |
| Description | beta glucosidase 13 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 74 | 545 | 0 |
| DWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDVAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKGVEY YNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSL SEPYIVAHNLLRAHAETVDIYNKYHKGADGRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFKEKEQEKLVGS YDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPPTGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALE DHTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRSARWLQEF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 566 Download |
| MALLLASAMN HTAHPAGLRS HPNNESFSRH HLCSSPQNIS KRRSNLSFRP RAQTISSESA 60 GIHRLSPWEI PRRDWFPPSF LFGAATSAYQ IEGAWNEDGK GPSTWDHFCH NFPEWIVDRS 120 NGDVAADSYH MYAEDVRLLK EMGMDAYRFS ISWPRILPKG TLAGGINEKG VEYYNKLIDL 180 LLENGIEPYI TIFHWDTPQA LVDAYGGFLD ERIIKDYTDF AKVCFEKFGK KVKNWLTFNE 240 PETFCSVSYG TGVLAPGRCS PGVSCAVPTG NSLSEPYIVA HNLLRAHAET VDIYNKYHKG 300 ADGRIGLALN VFGRVPYTNT FLDQQAQERS MDKCLGWFLE PVVRGDYPFS MRVSARDRVP 360 YFKEKEQEKL VGSYDMIGIN YYTSTFSKHI DLSPNNSPVL NTDDAYASQE TKGPDGNAIG 420 PPTGNAWINM YPKGLHDILM TMKNKYGNPP MYITENGMGD IDKGDLPKPV ALEDHTRLDY 480 IQRHLSVLKQ SIDLGADVRG YFAWSLLDNF EWSSGYTERF GIVYVDRENG CERTMKRSAR 540 WLQEFNGAAK KVENNKILTP AGQLN* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02998 | PLN02998 | 1.0e-124 | 73 | 545 | 475 | + beta-glucosidase | ||
| PLN02814 | PLN02814 | 2.0e-133 | 73 | 547 | 481 | + beta-glucosidase | ||
| COG2723 | BglB | 5.0e-149 | 76 | 544 | 477 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| TIGR03356 | BGL | 1.0e-159 | 77 | 541 | 467 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 0 | 73 | 546 | 480 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1V02 | 0 | 1 | 565 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1V03 | 0 | 1 | 565 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| GenBank | AAC49177.1 | 0 | 1 | 565 | 1 | 565 | dhurrinase [Sorghum bicolor] |
| RefSeq | XP_002442029.1 | 0 | 1 | 565 | 1 | 565 | hypothetical protein SORBIDRAFT_08g007570 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v02_E | 0 | 1 | 565 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1v03_A | 0 | 1 | 565 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1v02_F | 0 | 1 | 565 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1v02_D | 0 | 1 | 565 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1v02_C | 0 | 1 | 565 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| dhurrin degradation | RXN-9588 | EC-3.2.1 | dhurrinase2 β-glucosidase |
| DIMBOA-glucoside activation | RXN-7082 | EC-3.2.1 | DIMBOA glucoside β-D-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CX614535 | 260 | 1 | 260 | 0 |
| CX616382 | 254 | 1 | 254 | 0 |
| CF433233 | 252 | 1 | 252 | 0 |
| CN128187 | 237 | 104 | 340 | 0 |
| CN124533 | 239 | 111 | 349 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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