| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb08g007586.1 |
| Family | GH1 |
| Protein Properties | Length: 567 Molecular Weight: 64206.4 Isoelectric Point: 6.6564 |
| Chromosome | Chromosome/Scaffold: 8 Start: 13544669 End: 13573750 |
| Description | beta glucosidase 13 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 76 | 547 | 0 |
| DWFPPSFLFGAATASYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDVAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKGVEY YNKLIDLLLENGMEPYITIFHWDAPQALVDTYGGFLDERIIKDYTDFAKVCFEKFGKKVKNWFTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSL TEPYIVAHNLLRAHAETVDLYNKYHKGADGRIGLALNVFGRVPYTNTFLDQQAQEMSMDKCLGWFLEPVLRGDYPFSMRVSARDRLPYFKEKEQEKLVGS YDMIGINYYTSTFSKHNDISANYSPVLNTDDAYASQKTQGPDGNAIGPPTGNAWINMYPKGLHDILMTMKNKYGNPPIYITENGIGDIDKGDLPKAVALE DHTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERYGIVYLDRENGCERTMKRSARWFQEF | |||
| Full Sequence |
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| Protein Sequence Length: 567 Download |
| MALLLASAMN HTAHPAELRS HLGRPNNESF SRHHLCSSPQ NISKRRSNLS FRPRAQTISS 60 EPGIHMLSPW EIPRRDWFPP SFLFGAATAS YQIEGAWNED GKGPSTWDHF CHNFPEWIVD 120 RSNGDVAADS YHMYAEDVRL LKEMGMDAYR FSISWPRILP KGTLAGGINE KGVEYYNKLI 180 DLLLENGMEP YITIFHWDAP QALVDTYGGF LDERIIKDYT DFAKVCFEKF GKKVKNWFTF 240 NEPETFCSVS YGTGVLAPGR CSPGVSCAVP TGNSLTEPYI VAHNLLRAHA ETVDLYNKYH 300 KGADGRIGLA LNVFGRVPYT NTFLDQQAQE MSMDKCLGWF LEPVLRGDYP FSMRVSARDR 360 LPYFKEKEQE KLVGSYDMIG INYYTSTFSK HNDISANYSP VLNTDDAYAS QKTQGPDGNA 420 IGPPTGNAWI NMYPKGLHDI LMTMKNKYGN PPIYITENGI GDIDKGDLPK AVALEDHTRL 480 DYIQRHLSVL KQSIDLGADV RGYFAWSLLD NFEWSSGYTE RYGIVYLDRE NGCERTMKRS 540 ARWFQEFNGA AKKVENNKIL TPAGQLN 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02998 | PLN02998 | 5.0e-123 | 75 | 547 | 478 | + beta-glucosidase | ||
| PLN02814 | PLN02814 | 9.0e-131 | 75 | 549 | 481 | + beta-glucosidase | ||
| COG2723 | BglB | 4.0e-145 | 78 | 546 | 477 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| TIGR03356 | BGL | 2.0e-155 | 79 | 544 | 469 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 0 | 75 | 548 | 477 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1V02 | 0 | 1 | 567 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1V03 | 0 | 1 | 567 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| RefSeq | XP_002442029.1 | 0 | 1 | 567 | 1 | 565 | hypothetical protein SORBIDRAFT_08g007570 [Sorghum bicolor] |
| RefSeq | XP_002442031.1 | 0 | 1 | 567 | 1 | 567 | hypothetical protein SORBIDRAFT_08g007586 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v02_E | 0 | 1 | 567 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1v02_F | 0 | 1 | 567 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1v02_D | 0 | 1 | 567 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1v02_C | 0 | 1 | 567 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1v02_B | 0 | 1 | 567 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| dhurrin degradation | RXN-9588 | EC-3.2.1 | dhurrinase2 β-glucosidase |
| DIMBOA-glucoside activation | RXN-7082 | EC-3.2.1 | DIMBOA glucoside β-D-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CX614535 | 263 | 1 | 262 | 0 |
| CX616382 | 257 | 1 | 256 | 0 |
| CF433233 | 255 | 1 | 254 | 0 |
| CN128187 | 237 | 106 | 342 | 0 |
| CN124533 | 239 | 113 | 351 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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