| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb08g007610.1 |
| Family | GH1 |
| Protein Properties | Length: 311 Molecular Weight: 35173.8 Isoelectric Point: 6.9052 |
| Chromosome | Chromosome/Scaffold: 8 Start: 13743124 End: 13746145 |
| Description | beta glucosidase 16 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 8 | 283 | 0 |
| GDSIREPYLVGHNLLLAHAETVDLYNKFHRGEKGRIGLALNVMGTVPYGSTFLDEQAHERCMDYNLGWYLEPVVRGDYPHSMRSSVRDRLPHFTEKEQQK LVGSYDMIGINYYSSRFAKHVDITENFSPELNTHDCCATEEITGPNGNTIGPATGNAWVYMYPKGLKDILMITKKRYGNPPVYITENGMGDIDNGDLSME AALDDHIRLDYLQRHISVLKDSIDSGANVRGHFTWSLLDNFEWSSGYTERFGIVYVDRENGCKRTLKRSARWLKEF | |||
| Full Sequence |
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| Protein Sequence Length: 311 Download |
| MKCPDPTGDS IREPYLVGHN LLLAHAETVD LYNKFHRGEK GRIGLALNVM GTVPYGSTFL 60 DEQAHERCMD YNLGWYLEPV VRGDYPHSMR SSVRDRLPHF TEKEQQKLVG SYDMIGINYY 120 SSRFAKHVDI TENFSPELNT HDCCATEEIT GPNGNTIGPA TGNAWVYMYP KGLKDILMIT 180 KKRYGNPPVY ITENGMGDID NGDLSMEAAL DDHIRLDYLQ RHISVLKDSI DSGANVRGHF 240 TWSLLDNFEW SSGYTERFGI VYVDRENGCK RTLKRSARWL KEFNGAAKRP GNLIKPNFSE 300 INKIKVVTPA * 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02998 | PLN02998 | 3.0e-50 | 8 | 283 | 278 | + beta-glucosidase | ||
| COG2723 | BglB | 4.0e-55 | 6 | 282 | 287 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN02814 | PLN02814 | 1.0e-55 | 7 | 285 | 285 | + beta-glucosidase | ||
| TIGR03356 | BGL | 1.0e-59 | 11 | 279 | 272 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 7.0e-93 | 12 | 284 | 276 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1V02 | 0 | 1 | 310 | 263 | 561 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1V03 | 0 | 1 | 310 | 263 | 561 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| GenBank | AAK49119.1 | 0 | 1 | 310 | 262 | 571 | cyanogenic beta-glucosidase dhurrinase-2 [Sorghum bicolor] |
| RefSeq | XP_002443073.1 | 0 | 1 | 310 | 1 | 310 | hypothetical protein SORBIDRAFT_08g007610 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v02_F | 0 | 1 | 310 | 263 | 561 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1v02_D | 0 | 1 | 310 | 263 | 561 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1v02_C | 0 | 1 | 310 | 263 | 561 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1v02_B | 0 | 1 | 310 | 263 | 561 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1v02_A | 0 | 1 | 310 | 263 | 561 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| dhurrin degradation | RXN-9588 | EC-3.2.1 | dhurrinase2 β-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CN134551 | 276 | 36 | 311 | 0 |
| CN145798 | 259 | 53 | 311 | 0 |
| CN143668 | 244 | 1 | 244 | 0 |
| CN138826 | 239 | 73 | 311 | 0 |
| CN144829 | 238 | 74 | 311 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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