| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb08g007650.1 |
| Family | GH1 |
| Protein Properties | Length: 487 Molecular Weight: 55150.3 Isoelectric Point: 7.2789 |
| Chromosome | Chromosome/Scaffold: 8 Start: 13974377 End: 13979713 |
| Description | beta glucosidase 13 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 73 | 466 | 0 |
| DWFPPSFLVSAATSAYHIEGAWNEDGKGPSTWDHFCHEYPERIADRSNGDVAADSYHMYADDVKLLKEMGMDAYRFSISWSRILPKGTIAGGINEKGVEY YNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDDRIITDYTDFAKVCFQKFGTKVKNWFTFNEPETFCSVSYGTGVLAPGRCSPGVNCAVPTGNSL TEPYTVAHHLLLAHAETVDLYNKHHKAQERSMDNCLGWFLEPVVRGDYPFSMRASAKDRVPYFKEIEQEKLTGNAWINMYPKGLHDILMTMKNKYGNPPM YITENGIGDIDKGDLPKALALEDHTRLDYIQRHLSVLKQSIDLGANVRGYFAWSLLDNFEWSSGYTERFGIVYVDRDNGCERTMKRSAWWLQEF | |||
| Full Sequence |
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| Protein Sequence Length: 487 Download |
| MALLLASAMN HSAHPAGLRS QSNNQSFSRH HLCSSPKNIS KRRCKLSFRP RAERVGSENG 60 NHRLSPREIP RKDWFPPSFL VSAATSAYHI EGAWNEDGKG PSTWDHFCHE YPERIADRSN 120 GDVAADSYHM YADDVKLLKE MGMDAYRFSI SWSRILPKGT IAGGINEKGV EYYNKLIDLL 180 LENGIEPYIT IFHWDTPQAL VDAYGGFLDD RIITDYTDFA KVCFQKFGTK VKNWFTFNEP 240 ETFCSVSYGT GVLAPGRCSP GVNCAVPTGN SLTEPYTVAH HLLLAHAETV DLYNKHHKAQ 300 ERSMDNCLGW FLEPVVRGDY PFSMRASAKD RVPYFKEIEQ EKLTGNAWIN MYPKGLHDIL 360 MTMKNKYGNP PMYITENGIG DIDKGDLPKA LALEDHTRLD YIQRHLSVLK QSIDLGANVR 420 GYFAWSLLDN FEWSSGYTER FGIVYVDRDN GCERTMKRSA WWLQEFNGAA MKVQNNKILT 480 PASLTN* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02998 | PLN02998 | 3.0e-106 | 64 | 466 | 478 | + beta-glucosidase | ||
| PLN02814 | PLN02814 | 5.0e-110 | 75 | 468 | 471 | + beta-glucosidase | ||
| COG2723 | BglB | 5.0e-130 | 75 | 465 | 462 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| TIGR03356 | BGL | 1.0e-137 | 76 | 462 | 448 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 6.0e-179 | 72 | 467 | 468 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1V02 | 0 | 1 | 486 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1V03 | 0 | 1 | 486 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| RefSeq | XP_002442029.1 | 0 | 1 | 486 | 1 | 565 | hypothetical protein SORBIDRAFT_08g007570 [Sorghum bicolor] |
| RefSeq | XP_002442034.1 | 0 | 1 | 486 | 1 | 486 | hypothetical protein SORBIDRAFT_08g007650 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v02_E | 0 | 1 | 486 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1v03_A | 0 | 1 | 486 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1v02_F | 0 | 1 | 486 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1v02_D | 0 | 1 | 486 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1v02_C | 0 | 1 | 486 | 1 | 565 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| dhurrin degradation | RXN-9588 | EC-3.2.1 | dhurrinase2 β-glucosidase |
| DIMBOA-glucoside activation | RXN-7082 | EC-3.2.1 | DIMBOA glucoside β-D-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CX614535 | 260 | 1 | 259 | 0 |
| CX616382 | 254 | 1 | 253 | 0 |
| CF433233 | 252 | 1 | 251 | 0 |
| CX621016 | 238 | 1 | 237 | 0 |
| GR878233 | 291 | 9 | 293 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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