| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb08g011530.1 |
| Family | AA1 |
| Protein Properties | Length: 577 Molecular Weight: 63180.3 Isoelectric Point: 5.1049 |
| Chromosome | Chromosome/Scaffold: 8 Start: 27866755 End: 27869209 |
| Description | laccase 7 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 25 | 561 | 0 |
| ASIVEHTFNVGNLSISQLCQPPRIITAVNGQLPGPAIHASDGDTVVVHLVNQSPYNVTIHWHGIFQRGTPWADGPTMVTQCPVKPGGNYTYRFNVTEQEG TLWWHAHISYLRATVYGALVLRPRGGTEAYPFPTKPDREETVILGEWWNDNVYDLEQLAFLTGFTARNADAYTINGKPGDLYNCSNADQTYKFQVQSNET YLLRIINAALNTPLFFKVANHSFNVVGVDAAYTTPYDTDVVVIAPGQTVDALMVAGATVGRYYMAASPYDSAIPQGPPFSETTATAVVEYIGSEGEETPV LPSRPDYNDTATAFRFLSNLTALVLQDKPTVPLSVDTRMFVTVGLGVSDCQPRQVLCNRSTTVFSSSMNNNSFVLPAPGAVSMLQAHYSNATAGLYTRDF PDQPPVIFDYTADASDTAMLQYTPKSTKVKTLRYNETVEMVLQNTRLIAKESHPMHLHGYNFFVLAQGFGNYDEATATPQFNLVNPQERNTVAVPTGGWA VIRFLANNPGMWFMHCHFDAHLDLGLGMVFEVQDGPT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 577 Download |
| MAWPRSSLVL PFGLIALVFA CVAQASIVEH TFNVGNLSIS QLCQPPRIIT AVNGQLPGPA 60 IHASDGDTVV VHLVNQSPYN VTIHWHGIFQ RGTPWADGPT MVTQCPVKPG GNYTYRFNVT 120 EQEGTLWWHA HISYLRATVY GALVLRPRGG TEAYPFPTKP DREETVILGE WWNDNVYDLE 180 QLAFLTGFTA RNADAYTING KPGDLYNCSN ADQTYKFQVQ SNETYLLRII NAALNTPLFF 240 KVANHSFNVV GVDAAYTTPY DTDVVVIAPG QTVDALMVAG ATVGRYYMAA SPYDSAIPQG 300 PPFSETTATA VVEYIGSEGE ETPVLPSRPD YNDTATAFRF LSNLTALVLQ DKPTVPLSVD 360 TRMFVTVGLG VSDCQPRQVL CNRSTTVFSS SMNNNSFVLP APGAVSMLQA HYSNATAGLY 420 TRDFPDQPPV IFDYTADASD TAMLQYTPKS TKVKTLRYNE TVEMVLQNTR LIAKESHPMH 480 LHGYNFFVLA QGFGNYDEAT ATPQFNLVNP QERNTVAVPT GGWAVIRFLA NNPGMWFMHC 540 HFDAHLDLGL GMVFEVQDGP TAETSVPPPP ADLPHC* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 9.0e-47 | 33 | 148 | 118 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 6.0e-68 | 14 | 554 | 574 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 1.0e-71 | 8 | 555 | 572 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 5.0e-85 | 27 | 555 | 558 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 25 | 576 | 553 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA97328.1 | 0 | 22 | 576 | 100 | 657 | laccase family protein, putative [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC78752.1 | 0 | 29 | 576 | 26 | 576 | hypothetical protein OsI_18967 [Oryza sativa Indica Group] |
| GenBank | EEE53032.1 | 0 | 29 | 576 | 32 | 557 | hypothetical protein OsJ_35752 [Oryza sativa Japonica Group] |
| RefSeq | NP_001066518.1 | 0 | 29 | 576 | 26 | 576 | Os12g0259800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002442097.1 | 0 | 1 | 576 | 1 | 576 | hypothetical protein SORBIDRAFT_08g011530 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 48 | 554 | 23 | 521 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1asq_A | 0 | 48 | 554 | 23 | 521 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1asp_B | 0 | 48 | 554 | 23 | 521 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1asp_A | 0 | 48 | 554 | 23 | 521 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
| PDB | 1aso_B | 0 | 48 | 554 | 23 | 521 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
