y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb08g019260.1 |
Family | GT8 |
Protein Properties | Length: 536 Molecular Weight: 61325.6 Isoelectric Point: 8.8849 |
Chromosome | Chromosome/Scaffold: 8 Start: 49942740 End: 49947395 |
Description | galacturonosyltransferase 13 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 174 | 504 | 0 |
CLSLRLTDEYSSNALARKQLPPPELVPCLSDNSYYHFVLASDNILAASVVVRSTVRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVKGVHQF DWLTKENVPVLEAIETQRTARDRYHGSHRPRTSASDSPRVFAAKLQAGSPTYTNMLNHIRIYLPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLAGKVNG AVETCRGGDSWVMSKKFRNYFNFSHPLIAKNFDPSECAWAYGMNIFDLNAWRKTTIKDKYHHWVKENLKSNFTLWRLGTLPPGLIAFKGHVHPIDPSWHL LGLGYQEKTDISSVEQAAVIHYNGQSKPWLE |
Full Sequence |
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Protein Sequence Length: 536 Download |
MQIRLSPSMR SITISTSHGL LDLMRLKVAA RHFSYRTVFH TVLILAFLLP FVFILTAVMT 60 LEGFNKCSSL DCLGRRLGPR LLGRGNDGSM RLVRDLYVML DEVNSEEAPL DLKVPETFDE 120 FIWDMKNNDY DLRSFAFKLK ATMESMDKEL RSSRLSEQLN KHYAAIAIPK GLYCLSLRLT 180 DEYSSNALAR KQLPPPELVP CLSDNSYYHF VLASDNILAA SVVVRSTVRS SLKPERIVFH 240 VITDKKTYPA MHSWFALNSL SPAIVEVKGV HQFDWLTKEN VPVLEAIETQ RTARDRYHGS 300 HRPRTSASDS PRVFAAKLQA GSPTYTNMLN HIRIYLPELF PSLNKVVFLD DDVVVQHDLS 360 PLWDIDLAGK VNGAVETCRG GDSWVMSKKF RNYFNFSHPL IAKNFDPSEC AWAYGMNIFD 420 LNAWRKTTIK DKYHHWVKEN LKSNFTLWRL GTLPPGLIAF KGHVHPIDPS WHLLGLGYQE 480 KTDISSVEQA AVIHYNGQSK PWLEIGFKHL QPFWTKYVNY SNEFIRNCHI MEPQL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 5.0e-129 | 91 | 530 | 449 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 6.0e-132 | 130 | 530 | 405 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 4.0e-180 | 6 | 531 | 535 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 0 | 1 | 533 | 534 | + Probable galacturonosyltransferase | ||
PLN02659 | PLN02659 | 0 | 1 | 530 | 532 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY83641.1 | 0 | 90 | 535 | 1 | 446 | hypothetical protein OsI_38869 [Oryza sativa Indica Group] |
RefSeq | NP_001067123.1 | 0 | 1 | 535 | 1 | 554 | Os12g0578500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001145771.1 | 0 | 1 | 535 | 1 | 535 | hypothetical protein LOC100279278 [Zea mays] |
RefSeq | XP_002284273.1 | 0 | 1 | 532 | 1 | 533 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002443426.1 | 0 | 1 | 535 | 1 | 535 | hypothetical protein SORBIDRAFT_08g019260 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.00003 | 320 | 502 | 70 | 252 | A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 |
PDB | 1g9r_A | 0.00003 | 320 | 502 | 70 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.00003 | 320 | 502 | 70 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |