CAZyme Information

Basic Information
SpeciesSorghum bicolor
Cazyme IDSb08g019540.1
FamilyGT4
Protein PropertiesLength: 461 Molecular Weight: 51959.9 Isoelectric Point: 8.3797
ChromosomeChromosome/Scaffold: 8 Start: 50306923 End: 50310521
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT42624277.6e-23
  PTTPPIFISVAQFRPEKAHGLQLEAFALALQRLDPDFPKPKLQFVGSCRNKEDLDRLQKLKDRSTELQIDELVEFHRDISYSDLVRLLGGAISGLHSMTD
  EHFGISVVEYMAAGAIPIAHKSAGPMMDIVLDEDGHQTGFLASEKEEYTEAIIKVLRMRESERQEM
Full Sequence
Protein Sequence     Length: 461     Download
MAILAGLVAV LSALLAAVLR RLLIPRRRPA DAAGFFHPYT NDGGGGERVL WCAVRAVQEL    60
RPDLPCAVYT GDADAAPDAL AARALDRFGV RLLRPPQVVH LNKRKWIEAS TYPHFTMIGQ    120
SLGSVYLAWE ALTNFTPMFY FDTSGYAFTY PLARLFGCKV ICYTHYPTIS SDMVERVKHR    180
SSMYNNNSRI AGSIWLSRCK ILYYTIFSWL YGLVGSCAHL VMVNSSWTRS HILNIWKIPE    240
HTKRVYPPCD TSSLQVLPLE RPTTPPIFIS VAQFRPEKAH GLQLEAFALA LQRLDPDFPK    300
PKLQFVGSCR NKEDLDRLQK LKDRSTELQI DELVEFHRDI SYSDLVRLLG GAISGLHSMT    360
DEHFGISVVE YMAAGAIPIA HKSAGPMMDI VLDEDGHQTG FLASEKEEYT EAIIKVLRMR    420
ESERQEMAAV ARKRAQRFSD QRFHEDFTEA VRHILSAREA * 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd03801GT1_YqgM_like2.0e-21195452268+
pfam00534Glycos_transf_12.0e-21264434173+
cd03805GT1_ALG2_like3.0e-31106443354+
PLN02949PLN02949034460427+
cd03806GT1_ALG11_like034446416+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankABA99697.102945728456glycosyl transferase, group 1 family protein, expressed [Oryza sativa (japonica cultivar-group)]
GenBankEAZ21019.102945728412hypothetical protein OsJ_36668 [Oryza sativa Japonica Group]
RefSeqNP_001142345.102146021460hypothetical protein LOC100274516 [Zea mays]
RefSeqXP_002318120.102045626462predicted protein [Populus trichocarpa]
RefSeqXP_002443441.102146021460hypothetical protein SORBIDRAFT_08g019540 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2bis_C0.0003362450342427A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi
PDB2bis_B0.0003362450342427A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi
PDB2bis_A0.0003362450342427A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi
PDB3fro_C0.0003362450341426A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations
PDB3fro_B0.0003362450341426A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations
Metabolic Pathways
Pathway NameReactionECProtein Name
dolichyl-diphosphooligosaccharide biosynthesisRXN-5464EC-2.4.1.131GDP-Man:Man3GlcNAc2-PP-Dol α-1,2-mannosyltransferase
Transmembrane Domains
StartEnd
524
201223
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GO8408993391054430
GT0503453211354550
BG8380292881744610
JG9476092751854590
DY263372354343860
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_045_00152.10Aquca_045_00152.3Aquca_045_00152.4Aquca_045_00152.7Aquca_045_00152.8
Aquca_045_00152.2Aquca_045_00152.1Aquca_013_00559.1Aquca_013_00559.3
Arabidopsis lyrata497266
Arabidopsis thalianaAT2G40190.1
Brachypodium distachyonBradi4g03380.2
Brassica rapaBra004979Bra017025
Capsella rubellaCarubv10023116m
Chlamydomonas reinhardtiig1252.t1
Citrus clementinaCiclev10031450m
Citrus sinensisorange1.1g012436m
Cucumis sativusCucsa.368390.1
Eucalyptus grandisEucgr.G03076.1
Glycine maxGlyma16g02840.1Glyma07g06210.1
Gossypium raimondiiGorai.013G017200.1
Linum usitatissimumLus10028977
Manihot esculentacassava4.1_010258m
Medicago truncatulaAC235758_14.1AC233112_1009.1
Mimulus guttatusmgv1a005920m
Oryza sativaLOC_Os12g39340.1
Panicum virgatumPavirv00014744mPavirv00065689m
Physcomitrella patensPp1s269_93V6.1
Phaseolus vulgarisPhvul.010G113600.1
Populus trichocarpaPotri.012G095500.1
Prunus persicappa005444m
Ricinus communis29814.m000733
Setaria italicaSi021990m
Selaginella moellendorffii80274
Thellungiella halophilaThhalv10016619m
Vitis viniferaGSVIVT01032791001
Volvox carteriVocar20008969m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny