| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb08g021470.1 |
| Family | GT31 |
| Protein Properties | Length: 619 Molecular Weight: 67921.6 Isoelectric Point: 8.6316 |
| Chromosome | Chromosome/Scaffold: 8 Start: 53136985 End: 53139884 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 386 | 567 | 0 |
| ERMAIRKTWMQFPAIQSGNAVARFFVALSHRKEINAALKKEAEFFGDIVILPFIDRYELVVLKTVAICQHGVQNVTADYIMKCDDDTFVRLDVVLQQIAT YNRTLPLYLGNLNLYHTPQRRGKWAVTYEEWPEPAYPPYANGPGYVISSDIARDIASRHTNHSLRLFKMEDVSMGMWVEDYS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 619 Download |
| MKRARTSEGF LGVCRLRARR GLAPLLAAAA FAYLLLMSVR LAGLSGAVGT TPAVVGRRLA 60 TAGAGKPPLR RRVDEPPARA RGGTSGGGVS RYGRIAVQML RRQEAVGKRR KLWGRLGNFT 120 ELERVAAKAW ALGADAWEEA SAFAGDVDDS IASRSRDVAG DGEVKCPGSV ELDAGETVAF 180 LPCGLTAGSA VTVVGTAREA RPEHVQALVR SGGGNGMVPV AQFAVELRGL RAVDGEEPPS 240 ILHLNPRLRG DWSDRPVLEM NTCFRMQWGR AQRCRGYPSR DDDLEGKMFV LTIQAGVEGY 300 HINVGGRHVA SFPHRMGFTL EDATGLAITG GIDVHSVHAT ALPKAHPNSS LQQALEMSER 360 WKAHPVPEEP IHLFIGILSA TNHFTERMAI RKTWMQFPAI QSGNAVARFF VALSHRKEIN 420 AALKKEAEFF GDIVILPFID RYELVVLKTV AICQHGVQNV TADYIMKCDD DTFVRLDVVL 480 QQIATYNRTL PLYLGNLNLY HTPQRRGKWA VTYEEWPEPA YPPYANGPGY VISSDIARDI 540 ASRHTNHSLR LFKMEDVSMG MWVEDYSAST TVQYIHSLSF CQFGCVDDYF TAHYQSPSQM 600 LCLWEKLSAG HAGCCNYR* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam01762 | Galactosyl_T | 2.0e-15 | 387 | 569 | 204 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. |
| smart00908 | Gal-bind_lectin | 1.0e-20 | 182 | 338 | 157 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. |
| cd00070 | GLECT | 5.0e-22 | 178 | 338 | 162 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. |
| pfam00337 | Gal-bind_lectin | 4.0e-25 | 177 | 339 | 163 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). |
| PLN03133 | PLN03133 | 9.0e-91 | 144 | 618 | 541 | + beta-1,3-galactosyltransferase; Provisional |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA99401.2 | 0 | 1 | 618 | 1 | 658 | Galactosyltransferase family, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC69670.1 | 0 | 1 | 618 | 1 | 658 | hypothetical protein OsI_39103 [Oryza sativa Indica Group] |
| RefSeq | NP_001130382.1 | 0 | 1 | 618 | 1 | 648 | hypothetical protein LOC100191478 [Zea mays] |
| RefSeq | XP_002442535.1 | 0 | 1 | 618 | 1 | 618 | hypothetical protein SORBIDRAFT_08g021470 [Sorghum bicolor] |
| RefSeq | XP_002442536.1 | 0 | 1 | 617 | 1 | 602 | hypothetical protein SORBIDRAFT_08g021480 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2dyc_A | 0.001 | 181 | 347 | 22 | 157 | A Chain A, Crystal Structure Of The N-Terminal Domain Of Mouse Galectin-4 |
| PDB | 3i8t_A | 0.001 | 181 | 338 | 35 | 160 | A Chain A, N-Terminal Crd1 Domain Of Mouse Galectin-4 In Complex With Lactose |
| PDB | 3apb_B | 0.006 | 216 | 337 | 37 | 149 | A Chain A, N-Terminal Crd1 Domain Of Mouse Galectin-4 In Complex With Lactose |
| PDB | 3apb_A | 0.006 | 216 | 337 | 37 | 149 | A Chain A, N-Terminal Crd1 Domain Of Mouse Galectin-4 In Complex With Lactose |
| PDB | 3ap9_A | 0.006 | 216 | 337 | 37 | 149 | A Chain A, N-Terminal Crd1 Domain Of Mouse Galectin-4 In Complex With Lactose |
